Query= MSMg01no101_c24.b1 MSMg01no101_c24.b1 CHROMAT_FILE:
MSMg01no101_c24.b1 PHD_FILE: MSMg01no101_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:18 2005
(453 letters)
>mm_chr16_59981209_59982063
Length = 855
Score = 770 bits (398), Expect = 0.0
Identities = 441/456 (96%), Gaps = 4/456 (0%)
Strand = Plus / Plus
Query: 1 tatcttacccataaaaatcaaattaaatctaacatccaaaaatccctgatgtccatacaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 tatcttacccataaaaatctaattaaatctaacatccaaaaatccctgatgtccatagaa 260
Query: 61 aataagtgtcaaaagaaaaaaaaataagacaattacttgaaggctgttctgttgaaggag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataagtgtcaaaag-aaaaaaaataagacaattacttgaaggctgttctgttgaaggag 319
Query: 121 tttagatgacaaaaagatacaggatattgttttat--ttttttt-aatacagtattgctt 177
||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 320 tttagatgacaaaaagatacaggatgttgttttattatttttttaaatacagtattgctt 379
Query: 178 tcttggtgtttgtgtacttctggttctttcatgatgaagcaagactattctacatgaagt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcttggtgtttgtgtacttctggttctttcatgatgaagcaagactattctacatgaagt 439
Query: 238 ttccatgaattttccatggtataccttgcttaatgttgtgatcatgacagtcagcatgga 297
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 440 ttccatgaattttccatgggataccttacttaatgttgtgatcatgacagtcagcattga 499
Query: 298 atgctcagatgttggactgcagagtgatggtctcatgtagaaagtaggcactcttcatat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgctcagatgttggactgcagagtgatggtctcatgtagaaagtaggcactcttcatat 559
Query: 358 tgcttttcagtcttgctcttcctcaaaggatctttcattaatgatctcaggtagcattca 417
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgcttttcagtcttgcttttcttcaaaggatctttcattaatgatctcaggtagcattca 619
Query: 418 atataaaatatgaacagcggccctgaatttgatagg 453
||||||| |||| ||||| |||||||||||||||||
Sbjct: 620 atataaactatgtacagcagccctgaatttgatagg 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 855
Length adjustment: 10
Effective length of query: 443
Effective length of database: 845
Effective search space: 374335
Effective search space used: 374335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no101_c24.g1 MSMg01no101_c24.g1 CHROMAT_FILE:
MSMg01no101_c24.g1 PHD_FILE: MSMg01no101_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:18 2005
(401 letters)
>mm_chr16_60181962_60182764
Length = 803
Score = 714 bits (369), Expect = 0.0
Identities = 394/403 (97%), Gaps = 2/403 (0%)
Strand = Plus / Minus
Query: 1 ttacctcccttaatgttt--ttaatggtgattaaggaaatatttcaggagagaacctgga 58
|||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 603 ttacctcccttaatgtttagttaatggtgactaaggaaatatttcaggagagaacctgga 544
Query: 59 ctttggagtttaagtgaactttacgaagggtgcagcagtgtgctggcatcggactatgtt 118
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctttggagtttaagtgaactttaggaagggtgcagcagtgtgctggcatcggactatgtt 484
Query: 119 ctgaacactatagcatccaatgcaatattactttgtaatttcctggtatgggacctgaga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctgaacactatagcatccaatgcaatattactttgtaatttcctggtatgggacctgaga 424
Query: 179 caacataagaaaaattgatatcaacatcatgctgataaatgatgggcaaatcagaattta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 423 caacataagaaaaattgatatcaacatcatgctgataaatgatgggcaaatcaaaattta 364
Query: 239 taaccaattcagtcccaagttatgacattaaccattaagacattcctttgaaacagtacc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 taaccaattcagtcccaagttatgacattaaccattaagacattcctttgaaacagtacc 304
Query: 299 agtgagtagcaattcttaactataagaaaattattcaatcatgaattattaactcccaca 358
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agtgattagcaattcttaactataagaaaattattcaatcatgaattattaactcccaca 244
Query: 359 ctattgctacacttactattaaacactacaattactctttgtt 401
|||||||||||||||||||||||||||| || || ||||||||
Sbjct: 243 ctattgctacacttactattaaacactagaaatattctttgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 803
Length adjustment: 9
Effective length of query: 392
Effective length of database: 794
Effective search space: 311248
Effective search space used: 311248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
