Query= MSMg01no102_n08.b1 MSMg01no102_n08.b1 CHROMAT_FILE:
MSMg01no102_n08.b1 PHD_FILE: MSMg01no102_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:32 2005
(286 letters)
>mm_chr16_43925193_43925878
Length = 686
Score = 509 bits (263), Expect = e-148
Identities = 281/287 (97%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 caatgagagaagttttaaagtgaaatgctgtcttccccttaaaatcttccagaagacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 caatgagagaagttttaaagtgaaatgctgtcttccccttaaaatcttccagaagacagc 427
Query: 61 atttagtttttaaggtttccactagagggaagaaatgacaacccaccctgctaaatttat 120
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 426 atttagtttgtaaggtttccactagagggaaaaaatgacaacccaccctgctaaatttat 367
Query: 121 tacctgcactggagttgccctcgttctgttggcaagaaaagctcttccctgaagtgtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tacctgcactggagttgccctcgttctgttggcaagaaaagctcttccctgaagtgtaat 307
Query: 181 cacaccgctgtcaccgcagatgattgactctac-taggaacagcaatttgctatctaatc 239
|||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||
Sbjct: 306 cacaccgctgtcaccgcagatgattgacactacgt-ggaacagcaatttgctatctaatc 248
Query: 240 ttcattgtatttctaaccctgtcactagagatgctcgttctgattaa 286
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttcattgtaattctaaccctgtcactagagatgctcgttctgattaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_n08.g1 MSMg01no102_n08.g1 CHROMAT_FILE:
MSMg01no102_n08.g1 PHD_FILE: MSMg01no102_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:33 2005
(239 letters)
>mm_chr16_43772866_43773504
Length = 639
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Plus
Query: 1 actggaatgggtgtcattccaatgaagggtcacttgatagtgactccaaatagggcatat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 actggaatgggtgtcattccaatgcagggtcacttgatagtgactccaaatagggcatat 260
Query: 61 gaagacttgaaattacatggataaaatgggatagcaatacttttcatgctgggctgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagacttgaaattacatggataaaatgggatagcaatacttttcatgctgggctgaagt 320
Query: 121 tagtctcatttgtcatcacctaaaagggtaccttgttgactagaaagtatgatctgtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtctcatttgtcatcacctaaaagggtaccttgttgactagaaagtatgatctgtaag 380
Query: 181 gctgtccgctcaaacagttttaattttgtttgtttgtttgttttgtttttgtttttgtt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgtccgctcaaacagttttaattttgtttgtttgtttgttttgtttttgtttttgtt 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
