Query= MSMg01no107_h16.b1 MSMg01no107_h16.b1 CHROMAT_FILE:
MSMg01no107_h16.b1 PHD_FILE: MSMg01no107_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:09:25 2005
(208 letters)
>mm_chr16_37405771_37406378
Length = 608
Score = 402 bits (208), Expect = e-117
Identities = 208/208 (100%)
Strand = Plus / Minus
Query: 1 tttggaccattctgccaatcatggcttgagagagttgatgcagcatcgagattgttgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tttggaccattctgccaatcatggcttgagagagttgatgcagcatcgagattgttgaat 349
Query: 61 ctgtgtgcaatgagagatttatgttttaggtttatgcacttggagaatcagtctccaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ctgtgtgcaatgagagatttatgttttaggtttatgcacttggagaatcagtctccaagt 289
Query: 121 ctgtacttggagagtcagacttataaagtgttttgttgcaagcatatccagtgactcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctgtacttggagagtcagacttataaagtgttttgttgcaagcatatccagtgactcttt 229
Query: 181 ctcttcagtgccttttaaagcactgaag 208
||||||||||||||||||||||||||||
Sbjct: 228 ctcttcagtgccttttaaagcactgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 608
Length adjustment: 9
Effective length of query: 199
Effective length of database: 599
Effective search space: 119201
Effective search space used: 119201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no107_h16.g1 MSMg01no107_h16.g1 CHROMAT_FILE:
MSMg01no107_h16.g1 PHD_FILE: MSMg01no107_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:09:25 2005
(274 letters)
>mm_chr16_37251576_37252249
Length = 674
Score = 464 bits (240), Expect = e-135
Identities = 266/276 (96%), Gaps = 4/276 (1%)
Strand = Plus / Plus
Query: 1 aaggtgcaaatttttggaaggagaaaggaactctgcaaggaagaaaaggaaggtcctttc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 aaggtgcaaatttttggaaggagaaaggaactctgcagggaagaaaaggaaggtcctttc 260
Query: 61 cccaggagacatgagaggagacagacgtgcctataggcctagaaggtatagctagccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaggagacatgagaggagacagacgtgcctataggcctagaaggtatagctagccaca 320
Query: 121 tgactgcatcaggctagcagctgagttaacttagatgagctagttgag--tctgcccagg 178
||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tgactgcatcaagctagtagctgagttaacttagatgagctagttgagagtctgcccagg 380
Query: 179 gaaggcctaatctttaaaagttagaaagtctccatagttatttggggaactagctggtta 238
||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||
Sbjct: 381 gaaggcctaatctttaaaatttaga--gtctccatagttatttgggtaactagctggtta 438
Query: 239 agaaataactagtaccctattaatttccagcactaa 274
||||||||||||| ||||||||||||||||||||||
Sbjct: 439 agaaataactagtgccctattaatttccagcactaa 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
