TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTGTCTTGGACGGATAAAAGGACTAAGAGAAAAAATAACATTGTTTGG
AGCAATTAAAAACAATGCCTTCATGAAATTCACAGGCAAATGGATGGGAC
TAGAAAATATCATCCTGAGTGAGGTCACCCAGTCACAAAAGCCCACACAT
GGTATGCACTCATTGATAAGTGGATATTAGGCAAAAAGCTCGGAATACCC
AAGATACAACTCACAGACTATAAGAAGCTTAAGAAGAAGGCAGACCAAAG
TGTGGATGCTTCAGTCCTTAGCAGGAGGGAAAATACTAGAGGTAGAGGGT
GGGAGGGACTTGGGAGAAAGAGAGGAGGAGAGAAAAAGGGGGGCAGGATC
AGGTATGGGAGGACCCCCCATCCTTTTTCATGCTTTTCCTCCCTTTTTTT
TCTTTTCCTTCCTTCCCTCATTCCCTTTTTTCCCCCCTTCCCTCCTCCCC
CTTTTCTCCTTCCTCTTTTTTTTCCCTTTTTTCCCCCTTTCTCCCCTTTT
TTTCTTTCCCCTTTACCCTGTCCCTCCCTTTCTTTTCTCCTTTCCTCCCT
CCTTCCCTTTCCTCTTCCCCTTTCCCCTTTCTTTCCCGTTCCCTTCCCTT
CCCCCCGTTTTCCCCTTTCCCCCCTTTCCCTCACTTCTTTCCCCCCCTTT
TTTTCCCCTTTTTTCCCCCTCTCTCCCGCCCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACATATGCTGCGTGGTAAAATGGGTAAT
CCCAGCAATGGATAGCTCAGTTTGGTTGGAACTGAGACATGATGGACACA
CGTGTTGTGGTTAAACGCCCAGACACTCTAATAAGTGAATTCTAATAAGT
GATTTCACAACACAGAAAATCTCTTAAGTGGATACATTGACCATGGCCTA
GTTATATTGCACAAAACAAATGTAATACATTCATGTTCTGTTTGGTTCAG
CAAAGTTAAACAAATAGTAATTTCTTCTAGGCTTAATACATTGGGGTTTT
TTTGTGTCTTTTTGGTTTTGGCTTTTGGTTTTTAGGGCGTTTTGTTTTGT
TTTTTTGAGTAACTTTTGGAAGGAGATCCAAATGAAGTTTTACATTATTG
TACAACTCCCACTGCAGGCTACAAAGACAGGATTCGATCAAGGTTTTACC
TTCGGGGTCTCAGACCCTTCTTTTCTTCCTCTCAGCTTCGGCTATAGCTA
GCATAAGCCATTTCTAAGCAAGGGATTCAAGCCAGATAGAGCTATCCTGT
GCTCCTGTACTCCACACTCCTGAAGTTGGGTGGTCAGGATGCTGGGGTAA
CCTTCCAGATCACACCTTTCATGAAAAAGTACTTGAAGACAGTCTGACTT
CT

Query= MSMg01no108_e09.g1 MSMg01no108_e09.g1 CHROMAT_FILE:
MSMg01no108_e09.g1 PHD_FILE: MSMg01no108_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:05 2005
         (545 letters)



>mm_chr16_85547270_85548216
          Length = 947

 Score = 1004 bits (519), Expect = 0.0
 Identities = 540/547 (98%), Gaps = 2/547 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatatgctgcgtggtaaaatgggtaatcccagcaatggatagctcagtttggttggaac 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 747 acatatgctgcgtggtaaaatgggtaatctcagcaatggatagctcagtttggttggaac 688

                                                                       
Query: 61  tgagacatgatggacacacgtgttgtggttaaacgcccagacactctaataagtgaattc 120
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 687 tgagacatgatggacacacgtgttgtggttaaacgcccggacactctaataagtgaattc 628

                                                                       
Query: 121 taataagtgatttcacaacacagaaaatctcttaagtggatacattgaccatggcctagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 taataagtgatttcacaacacagaaaatctcttaagtggatacattgaccatggcctagt 568

                                                                       
Query: 181 tatattgcacaaaacaaatgtaatacattcatgttctgtttggttcagcaaagttaaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tatattgcacaaaacaaatgtaatacattcatgttctgtttggttcagcaaagttaaaca 508

                                                                       
Query: 241 aatagtaatttcttctaggcttaatacattggggt-ttttttgtgtctttttggttttgg 299
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 507 aatagtaatttcttctaggcttaatacattggggggttttttgtgtctttttggttttgg 448

                                                                       
Query: 300 cttttggtttttagggcgttttgttttgtttttttg-agtaacttttggaaggagatcca 358
           |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 447 cttttggtttttagggcgttttgttttgtttttttttagtaacttttggaaggagatcca 388

                                                                       
Query: 359 aatgaagttttacattattgtacaactcccactgcaggctacaaagacaggattcgatca 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aatgaagttttacattattgtacaactcccactgcaggctacaaagacaggattcgatca 328

                                                                       
Query: 419 aggttttaccttcggggtctcagacccttcttttcttcctctcagcttcggctatagcta 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aggttttaccttcggggtctcagacccttcttttcttcctctcagcttcggctatagcta 268

                                                                       
Query: 479 gcataagccatttctaagcaagggattcaagccagatagagctatcctgtgctcctgtac 538
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gcagaagccatttctaagcaagggattcaagccagatagagctatcctgtgctcctgtac 208

                  
Query: 539 tccacac 545
           |||||||
Sbjct: 207 tccacac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 947
Length adjustment: 10
Effective length of query: 535
Effective length of database: 937
Effective search space:   501295
Effective search space used:   501295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)