Query= MSMg01no111_i11.b1 MSMg01no111_i11.b1 CHROMAT_FILE:
MSMg01no111_i11.b1 PHD_FILE: MSMg01no111_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:58 2005
(659 letters)
>mm_chr16_70731915_70732970
Length = 1056
Score = 1189 bits (615), Expect = 0.0
Identities = 647/659 (98%), Gaps = 3/659 (0%)
Strand = Plus / Plus
Query: 1 tgctgtatgtattatttcaagaagtcttaggcagtcctcaggtcatggtagcatttgtgt 60
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 201 tgctgtatgtattatttcaagaagtcttaggcagccctcaggtcattgtagcatttgtgt 260
Query: 61 tgtctggaaagaaaatcttaaagttgtgccatattctaagtttagctaaagaacacatgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tgtctggaaagaaaatcttaaagttgtgccatattctaagtttagctaaa---cacatgg 317
Query: 121 cattttattatcaaaaggaagaacttggtttttgttaccttgtttctatgggatgtgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cattttattatcaaaaggaagaacttggtttttgttaccttgtttctatgggatgtgaaa 377
Query: 181 aatgggcatttttcaaatacactaacactcctaaacaaagtgctctgtagtcacatgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aatgggcatttttcaaatacactaacactcctaaacaaagtgctctgtagtcacatgttt 437
Query: 241 gagtagtgaattaagctgcctagcatatgtttcatggtatttgagaggcatgcatcttct 300
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 438 gagtagtgaattaagctgcctagcatatgtttcatggtatttgaaaggcatgcatcttcc 497
Query: 301 taaattatccatgctagtgttgttgctgagtaagaagtacttcatagtgtggctttgtta 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 498 taaattatccatgctagtgttgttgctgaataagaagtacttcatagtgtggctttgtta 557
Query: 361 ttgtttctacaatgtaacttaatcctcaaaactgaagagacaaaatattaactgaaactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttgtttctacaatgtaacttaatcctcaaaactgaagagacaaaatattaactgaaactc 617
Query: 421 ttttacagcaactgacaattggagtatgacctctgagataatcttccatttttaaatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttttacagcaactgacaattggagtatgacctctgagataatcttccatttttaaatatt 677
Query: 481 catttgtgataaattttattcctacctcctaataattatgacattatgtgcaattttaaa 540
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 678 catttgtgataaattttatccctacctcctaataattatgacattatatgcaattttaaa 737
Query: 541 atgatgttttgtaattaatcaatataattcatattttttctaattaaatggactggtctg 600
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 738 atgatgttttataattaatcaatataattcatattttttccaattaaatggactggtctg 797
Query: 601 tcttacattttaaatatgtaaaaggttcttaataattgcattcaactcatcactccaaa 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tcttacattttaaatatgtaaaaggttcttaataattgcattcaactcatcactccaaa 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1056
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1046
Effective search space: 678854
Effective search space used: 678854
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_i11.g1 MSMg01no111_i11.g1 CHROMAT_FILE:
MSMg01no111_i11.g1 PHD_FILE: MSMg01no111_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:59 2005
(703 letters)
>mm_chr16_70806519_70807621
Length = 1103
Score = 1168 bits (604), Expect = 0.0
Identities = 647/686 (94%), Gaps = 39/686 (5%)
Strand = Plus / Minus
Query: 18 caaatctcctgagctttataaaaccgttttggagtcctgcttattaaactttgcttttaa 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 caaatctcctgagctttataaaaccgttttggagtcctgcttattaaactttgcttttaa 1044
Query: 78 tatttgatctgccactgacacaagctgtatgcctgactctgattttgaaggaaagaaaaa 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 tatttgatctgccactgacacaagctgtatgcctgactctgattttgaaggaaagaaaaa 984
Query: 138 gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa 924
Query: 198 gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaagg 257
||||||||||||||||| ||| |
Sbjct: 923 gaagaagaagaagaaga--------------------------------------aaa-g 903
Query: 258 tatttttatttttcatcacaatttgtaaaaggaatgaaatttaagtttcttcataggtat 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 tatttttatttttcatcacaatttgtaaaaggaatgaaatttaagtttcttcataggtat 843
Query: 318 tttatatttctcatcagtcttttcatttgccctttgcttctagctgaatgataccaatcc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tttatatttctcatcagtcttttcatttgccctttgcttctagctgaatgataccaatcc 783
Query: 378 actctagtaacaaagcagagatgaaagatttcatatgttatgagattgtaaataagcagc 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 actctagtaacaaagcagagatgaaagatttcatatgttatgagattgtaaataagcagc 723
Query: 438 cccaatagcattagttactctgcagcctaaatactgttaaggatttttaaagagccaatg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 cccaatagcattagttactctgcagcctaaatactgttaaggatttttaaagagccaatg 663
Query: 498 tgtggttaagagggatcagttctttctacataaacactgatctttcatctgccctgaaca 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgtggttaagagggatcagttctttctacataaacactgatctttcatctgccctgaaca 603
Query: 558 ccaatattttatctactttcaattcagttgccatatatttctataaatatgttcacctgt 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ccaatattttatctactttcaattcagttgccatatatttctataaatatgttcacctgt 543
Query: 618 taaaatgagaacagacagttagacttggtggcacaggtggaagtttcactgtcagcccca 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 taaaatgagaacagacagttagacttggtggcacaggtggaagtttcactgtcagcccca 483
Query: 678 tagtcatgaaaaattgtaaaaccaaa 703
||||||||||||||||||||||||||
Sbjct: 482 tagtcatgaaaaattgtaaaaccaaa 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 141
Number of extensions: 48
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 43
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space: 757449
Effective search space used: 757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
