Query= MSMg01no111_n23.b1 MSMg01no111_n23.b1 CHROMAT_FILE:
MSMg01no111_n23.b1 PHD_FILE: MSMg01no111_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:44 2005
(336 letters)
>mm_chr16_32799683_32800418
Length = 736
Score = 520 bits (269), Expect = e-152
Identities = 320/345 (92%), Gaps = 17/345 (4%)
Strand = Plus / Minus
Query: 1 ccttgttatccagtaccacaacctgaaccgccatgccgcccatgcacacatacaccaaca 60
||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 347 ccttgttattcagtaccgcaacctgaaccgccatgccgcccatgcacacatacacccaca 288
Query: 61 taccccagctcttcaatgtctctttctttctcggtcacttacaaatttctattcccttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 taccccagctcttcaatgtctctttctttctcggtcacttacaaatttctattcccttgt 228
Query: 121 tcactgcccacccagtcttcaggacttagctcctgagggc--tggccctgtctgttttcc 178
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 227 tcactgcccacccagtcttcaggacttagctcctgagggccat--ccctgtctgttttcc 170
Query: 179 tccatgatgtattacctcaagagctgagaccaatgtctgac-------gtatagaagcat 231
|| ||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 169 tctgtgatgtattacctcaagagctgagaccaatgtctgacattgcttgt-ta-----at 116
Query: 232 gtgcttattaatgtagtgagacttgtgccttgtgctaactcgtggtgatatctgagctgg 291
|||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 115 gtgcttgttaatgtagtgagacttgtgccttgtgctaactcgtggtgagagctgagctgg 56
Query: 292 gctgtgaagaaatggtccaagaactttccagtgaagtttgtgatg 336
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 gctgtgaagaaatggtccaagaactttccagtgaagtttgtgatg 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_n23.g1 MSMg01no111_n23.g1 CHROMAT_FILE:
MSMg01no111_n23.g1 PHD_FILE: MSMg01no111_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:44 2005
(252 letters)
>mm_chr16_32631737_32632388
Length = 652
Score = 480 bits (248), Expect = e-140
Identities = 251/252 (99%)
Strand = Plus / Plus
Query: 1 catttggtgggtaaaatcaactgctgtaaaatcattacttccaagatccttttttaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttggtgggtaaaatcaactgctgtaaaatcattacttccaagatccttttttaaaat 260
Query: 61 gtgggtattttgttatctctggtttatggaataaaagcatacgtttataatgtttgctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgggtattttgttatctctggtttatggaataaaagcatacgtttataatgtttgctgg 320
Query: 121 tgacaaaggaatttaactatctccctttatttgcatgttacatgttatttcctaaatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacaaaggaatttaactatctccctttatttgcatgttacatgttatttcctaaatgta 380
Query: 181 gttcttagaagtttgaattcatttttggtttttgggagggtagaaagtatagaataatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 gttcttagaagtttgaattcatttttggtttttgggagggtagaaagtagagaataatgg 440
Query: 241 gtgttgggaaga 252
||||||||||||
Sbjct: 441 gtgttgggaaga 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
