Query= MSMg01no115_o04.b1 MSMg01no115_o04.b1 CHROMAT_FILE:
MSMg01no115_o04.b1 PHD_FILE: MSMg01no115_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:57 2005
(318 letters)
>mm_chr16_44663774_44664492
Length = 719
Score = 563 bits (291), Expect = e-165
Identities = 309/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 5 gaattcattctgtctccttttttttttacaggaatatcatgtataacaatcaattgtgat 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattcattctgcctgattttttttttacaggaatatcatgtataacaatcaattgtgat 460
Query: 65 gggtaatgtttaatgctttggcgggggagaaggcagaagacagaggg-aagaaaacccaa 123
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 459 gggtaatgtttaatgctttggcgggggagaaggcagaagacagagggaaaaaaaacccaa 400
Query: 124 tacttgtgaaagttctaatgtgagcttgaatgtttgcttaaatagtctggaccctgtaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tacttgtgaaagttctaatgtgagcttgaatgtttgcttaaatagtctggaccctgtaag 340
Query: 184 ggtgtaattgcaatccttgcatagggtagccacttcttccattcatgcactgagcaataa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ggtgtaattgcaatccttgcatagggtagccacttcttccattcatgcactgagcaataa 280
Query: 244 atagcactctagaaacccttaggactgaaacataagcctctcttggaaggctgttctctc 303
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atagcactctcgaaacccttaggactgaaacataagcctctcttggaaggctgttctctc 220
Query: 304 tagttaacacacaag 318
|||||||||||||||
Sbjct: 219 tagttaacacacaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_o04.g1 MSMg01no115_o04.g1 CHROMAT_FILE:
MSMg01no115_o04.g1 PHD_FILE: MSMg01no115_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:57 2005
(436 letters)
>mm_chr16_44535061_44535895
Length = 835
Score = 748 bits (387), Expect = 0.0
Identities = 424/437 (97%), Gaps = 3/437 (0%)
Strand = Plus / Plus
Query: 1 aacactgtagtccctggagagagaacaagtatatgtacttctaaatcttctgatgcttag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 aacactgtagtccctggagagagaacaagtatatgtacttctaaatctcctgatgcttag 260
Query: 61 agtggacaaaa-ggaaacactaagattttatagcctggagagatagttgttttttttttt 119
||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 agtggacaaaaaggaaaggctaagattttatagcctggagagatagttggttttttttt- 319
Query: 120 taaaggtaaaattcaaaccatttccaggacatataattaaagtagaccctaaaagcttca 179
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 320 -aaaggtaaaattcaaaccatttccaggacatataattaaagtagatcctaaaagcttca 378
Query: 180 agtcctatctctcagggcaagggaatcagtgtattagcacaaagcccactgtcacacata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agtcctatctctcagggcaagggaatcagtgtattagcacaaagcccactgtcacacata 438
Query: 240 gactcatagcaagtccaacacactgtgtctgcctgtaagttcccagtgaaaacaaggggc 299
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggctcagagcaagtccaacacactgtgtctgcctgtaagttcccagtgaaaacaaggggc 498
Query: 300 cccaagaacagggtgctattatagaaggaaattctcctagaaccacgctagtactcagcc 359
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 499 cccaagaacagggtgctattatagaaggaaattctcctagaaacaggctagtactcagcc 558
Query: 360 atatgcaagacctcaggaaggtgcttcctccaaaccatgcagaaggacaacagaattcgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atatgcaagacctcaggaaggtgcttcctccaaaccatgcagaaggacaacagaattcgg 618
Query: 420 atggggagtggagtaag 436
||||||||| |||||||
Sbjct: 619 atggggagttgagtaag 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 835
Length adjustment: 9
Effective length of query: 427
Effective length of database: 826
Effective search space: 352702
Effective search space used: 352702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
