Query= MSMg01no116_e24.b1 MSMg01no116_e24.b1 CHROMAT_FILE:
MSMg01no116_e24.b1 PHD_FILE: MSMg01no116_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:32 2005
(454 letters)
>mm_chr16_76852626_76853479
Length = 854
Score = 785 bits (406), Expect = 0.0
Identities = 448/480 (93%), Gaps = 28/480 (5%)
Strand = Plus / Plus
Query: 1 tcattctatgattctagaagatacatacacgatgcattcagatgtctggttttgattttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattctatgattctagaagatacatacacgatgcattcagatgtctggttttgattttt 260
Query: 61 ttttaacaacattcaatcagattatggttcccaagggagaaagtaagataacagcctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaacaacattcaatcagattatggttcccaagggagaaagtaagataacagcctgga 320
Query: 121 gagatgcctcagctaggagatgcttgctgcataagcagagtcataagcctcgatcctcag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagatgcctcagctaggagatgcttgctgcataagcagagtcataagcctcgatcctcaa 380
Query: 181 cactctcctaaaaagtgtcagagcagcacatccctagagccccattgctgtagaggatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactctcctaaaaagtgtcagagcagcacatccctagagccccattgctgtagaggatgg 440
Query: 241 aacaggccagatccgtggggcttgcagacaactccaaccaactggcagcctcagaatcag 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaggccagatccgtggggcttgaagacaactccaaccaactggcagcctcagaatcag 500
Query: 301 tgagagaccctgcttcaaaacaatacagaggggaagtattgagtgggagacctgctgtca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 tgagagaccctgcttcaaaacaatacagaggggaagtattgagtgggagacctgatgtca 560
Query: 361 acattggtaccctataaactaccaacacacacactcac---------------------- 398
|||||||||||||||||||||||||||||||||| |||
Sbjct: 561 acattggtaccctataaactaccaacacacacacacacacacacacacacacacacacac 620
Query: 399 ------tctctctctctctctctctctctctctctctctctctctctctctctctctctc 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acacattctctctctctctctctctctctctctctctctctctctctctctctctctctc 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 35
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_e24.g1 MSMg01no116_e24.g1 CHROMAT_FILE:
MSMg01no116_e24.g1 PHD_FILE: MSMg01no116_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:32 2005
(294 letters)
>mm_chr16_76997519_76998212
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%)
Strand = Plus / Minus
Query: 1 cctcacaaattgcactaatcaaatgcttatctagacctaaagcatctattgcttgtgaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 494 cctcacaaattgcactaatcaaatgcttatctagacctaaagcatctattgcttgtgagg 435
Query: 61 caaagacagatcgttttaatttcattctagaaatgggaatagtagggagcgagtgagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 caaagacagatcgttttaatttcattctagaaatgggaatagtagggagcgagtgagaac 375
Query: 121 ccagtgggaattagagaatgagaattttcagtgtgatctccttcatctaactagagatgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 374 ccagtgggaattagagaatgagaattttcagtgtgatctccttcatctaactagagatat 315
Query: 181 agtaatagactgtactggtcactgaaaattatctctttggatggagcttcccagtcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agtaatagactgtactggtcactgaaaattatctctttggatggagcttcccagtcattt 255
Query: 241 ttcatttcttttcctttttttccctctatcagatatcagcacactttcttaact 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttcatttcttttcctttttttccctctatcagatatcagcacactttcttaact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
