Query= MSMg01no116_o08.b1 MSMg01no116_o08.b1 CHROMAT_FILE:
MSMg01no116_o08.b1 PHD_FILE: MSMg01no116_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:17 2005
(635 letters)
>mm_chr16_82854478_82855512
Length = 1035
Score = 1122 bits (580), Expect = 0.0
Identities = 619/632 (97%), Gaps = 2/632 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttttctcg-cattgttgaatgtttgtaagatatccacagcacagttcaatac 63
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattcctttttctcgtcattgttgaatgtttgtaagatatccacagcacggttcaatac 264
Query: 64 agggcgtctctgctgatgacttgtcaattactgacaatatattttgccaggttccatcat 123
|||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 265 agggcgactctgctgatgacttgccaaatactgacaatatattttgccaggttccatcat 324
Query: 124 gctgtgtattacaagcaaacaaaactaagttacctaaatgtctgagagagaactcaggac 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 gctgtgtattacaagcaaacaaaactaagttacctaaatgtctgagaaagaactcaggac 384
Query: 184 tatatgaataacaagtagagaagctggaagccaacaggacataaccagaaaaaagagaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatatgaataacaagtagagaagctggaagccaacaggacataaccagaaaaaagagaaa 444
Query: 244 ggtcattgacatagtaccatatgcatatttcaccctttaagaccacagtattgacagaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtcattgacatagtaccatatgcatatttcaccctttaagaccacagtattgacagaag 504
Query: 304 gtatatctgtttaggtgaaataatagaaaacaaggtaagtcaatgtgggagaccttcctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtatatctgtttaggtgaaataatagaaaacaaggtaagtcaatgtgggagaccttcctt 564
Query: 364 tcagaggtatgacaagactattaatgaaatcaatattttttcttttggccttaaactatg 423
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 565 tcagaggtatgacaagactattaatggaatcaatattttttcttttggccttaaactata 624
Query: 424 taatgttattttcattaaattcaaagtaaatattatataaaaaattaacaaatatttacc 483
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 625 taatgttattttcattaaattcaaagtaaatattatataaaaa-ttaacaaatatttacc 683
Query: 484 ttagcctctcaaaaattccacaatgtgcaagttggtgataagtccagttaataaagtgct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttagcctctcaaaaattccacaatgtgcaagttggtgataagtccagttaataaagtgct 743
Query: 544 tattaagcaaataaaaggaccagtgtttcgatatctggatgatatacaaagtgctacata 603
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 744 tataaagcaaataaaaggaccagtgtttggatatctggatgatatacaaagtgctacata 803
Query: 604 taatgcgataagccttaacttggggaatgaag 635
||||| ||||||||||||||||| ||||||||
Sbjct: 804 taatgtgataagccttaacttggagaatgaag 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_o08.g1 MSMg01no116_o08.g1 CHROMAT_FILE:
MSMg01no116_o08.g1 PHD_FILE: MSMg01no116_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:17 2005
(616 letters)
>mm_chr16_82968424_82969439
Length = 1016
Score = 1176 bits (608), Expect = 0.0
Identities = 614/616 (99%)
Strand = Plus / Minus
Query: 1 atcattacaggaaatctatttgctccaatctcttgctcagaatttgatcatggccagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 atcattacaggaaatctatttgctccaatctcttgctcagaatttgatcatggccagaat 757
Query: 61 gtttctggtataattctattaaaatatattaatatgtatggcagttatattttctacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gtttctggtataattctattaaaatatattaatatgtatggcagttatattttctacata 697
Query: 121 tttgttatttttcctatggatatcattggacctaaaagcaacttaatatcttagtcaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tttgttatttttcctatggatatcattggacctaaaagcaacttaatatcttagtcaaaa 637
Query: 181 gacaaattgcagaatacaatagaattttagtatcagtatttcatacttttaaatatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gacaaattgcagaatacaatagaattttagtatcagtatttcatacttttaaatatttat 577
Query: 241 tcctaacagtcattgttttctggcctgattattagacaattttaaatcaccagtgtgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tcctaacagtcattgttttctggcctgattattagacaattttaaatcaccagtgtgcag 517
Query: 301 cttcttaccatccattgcaattcatgtcctggtcacggcatcacaaactctcatagcaat 360
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 516 cttcttaccatccattgcaattcatgtcctggtcatggcatcacaaactctcatggcaat 457
Query: 361 ttattgcaatagcgtcaaaatttggcactcctgacatgatcttaaacactatttccttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttattgcaatagcgtcaaaatttggcactcctgacatgatcttaaacactatttccttcc 397
Query: 421 cttctttactctgagactctaagttagccttgtgcctctccagtcaccccaacgaatgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cttctttactctgagactctaagttagccttgtgcctctccagtcaccccaacgaatgga 337
Query: 481 aactacatcatgtatttttacatttttcattctctggagttcattttaagatctgataac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aactacatcatgtatttttacatttttcattctctggagttcattttaagatctgataac 277
Query: 541 cactgagcacttggattcctctgccaaagtttcagcaaatatatttcatccactttatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cactgagcacttggattcctctgccaaagtttcagcaaatatatttcatccactttatcc 217
Query: 601 aatagctgcttctggg 616
||||||||||||||||
Sbjct: 216 aatagctgcttctggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
