Query= MSMg01no117_e16.b1 MSMg01no117_e16.b1 CHROMAT_FILE:
MSMg01no117_e16.b1 PHD_FILE: MSMg01no117_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:48 2005
(522 letters)
>mm_chr16_9585519_9586440
Length = 922
Score = 932 bits (482), Expect = 0.0
Identities = 509/518 (98%)
Strand = Plus / Minus
Query: 5 gaattcttaagacttacccattaagtaaatgccagagcttagtgaactgtagatcccacc 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gaattcttaagacttattcattaagtaaatgccagagcttagtgaactgtagatcccacc 663
Query: 65 tggagtaattactagacattgagatcatggaattttatactaaatgggcactggataaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tggagtaattactagacattgagatcatggaattttatactaaatgggcactggataaaa 603
Query: 125 tccagagaagaaatggtgctaggcccgcctcctttttatttccagtgaaaagtgcacctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tccagagaagaaatggtgctaggcccgcctcctttttatttccagtgaaaagtgcacctg 543
Query: 185 tttctttagttgcctgttgaagtgaggaagatgttcactttgcaagcgaccattcagagc 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tatctttagttgcctgttgaagtgaggaagatgttcactttgcaagcgaccattcagagc 483
Query: 245 caagataacttttccaacaagtgtttagcatcttatgtccattatttgtgggtgaatttt 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 482 caagataacttttccaacaagtgtttagcatcttaggtccattatttgtgggtgaatttt 423
Query: 305 tggagttgtttggggtgttctaaacacgagaaagaagaagctaatgtacccgaggaccgc 364
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 422 tggagttgtttggggtgttctaaacacgagaaagaagaagctaatgtacctgaggaccac 363
Query: 365 catctgccagacactgctccaggcattttcctcaggatgatcactagctattaattgaga 424
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 362 catctgccagacactgctccaggcattttcctcaggatgatcactagctattgattgaga 303
Query: 425 ctcagctggccctcaccgcaacaccctcaagtatgacctcacgctgtacatgctccatag 484
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 302 ctcagctggccctcaccacaacaccctcaagtatgacctcacactgtacatgctccatag 243
Query: 485 gcaggagagctgggacttcagcaccacacagctagtaa 522
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcaggagagctgggacttcagcaccacacagctagtaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_e16.g1 MSMg01no117_e16.g1 CHROMAT_FILE:
MSMg01no117_e16.g1 PHD_FILE: MSMg01no117_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:48 2005
(410 letters)
>mm_chr16_9432310_9433119
Length = 810
Score = 694 bits (359), Expect = 0.0
Identities = 398/411 (96%), Gaps = 2/411 (0%)
Strand = Plus / Plus
Query: 1 cttggcttcaaagggcagtgtcaagttatttggaatgagatttggcacagcagtggaagt 60
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 201 cttggcttcaaagggcagtgttaagttatttggaatgagatttggcacagcaatggaagt 260
Query: 61 aaaatagcttttctggggaaagcattct-ggaacagtataaatggaagaacctcagagaa 119
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 261 aaaatagcttttctggggaaagcat-cttggaacagtataaatggaagaacctcagagaa 319
Query: 120 gtaggggcagaagattagcatgagaaggtacatgaacagatgtgggcaactggagacccg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtaggggcagaagattagcatgagaaggtacatgaacagatgtgggcaactggagacccg 379
Query: 180 gagactactgtagggcttctattggacagttatagcaggcaactgtgataggaagtttta 239
|||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 380 gagactgctgtagggcttctattggatagttatagcaggcaattgtgataggaagtttta 439
Query: 240 gaacatatttgtttgttttgcattttctattgtttagtttgcttgtttgatatttctctt 299
|||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 440 gaacgtatttgtttggtttgcattttctattgtttaatttgcttgtttgatatttctctt 499
Query: 300 taaaggtgagagggacttaaatatgctctatacacgatacaaaggactgagaagggggaa 359
||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 taaagatgggagggacttaaatatgctctatacatgatacaaaggactgagaagggggaa 559
Query: 360 gggaaggagagcaagaaggaaggaggtagggttgggtataggtgtgtgaca 410
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gggaaggagagcaagaaggaaggaggtagggttgggtataggtgtgtgaca 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
