Query= MSMg01no118_b02.b1 MSMg01no118_b02.b1 CHROMAT_FILE:
MSMg01no118_b02.b1 PHD_FILE: MSMg01no118_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:48 2005
(458 letters)
>mm_chr16_75262374_75263231
Length = 858
Score = 872 bits (451), Expect = 0.0
Identities = 454/455 (99%)
Strand = Plus / Plus
Query: 4 ggaattcttctctgcccattcactttaaatggttgaaaataaaggagagaactaggggca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttctctgcccattcactttaaatggttgaaaataaaggagagaactaggggca 263
Query: 64 tatctcagtaggtaaagggcctacaaaacaagcttaaaagaacagtgtttgagcatctca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatctcagtaggtaaagggcctacaaaacaagcttaaaagaacagtgtttgagcatctca 323
Query: 124 cctctccccctaaatatctaggtgatttggtacatttttgtaacctcaacaatagtgagg 183
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 cctctccccctaaatatctaggtgatttggtacatttttgtaaccttaacaatagtgagg 383
Query: 184 tagaggcaataggcttcctggttttcatagcaaggctagctctctttatcattgagctct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagaggcaataggcttcctggttttcatagcaaggctagctctctttatcattgagctct 443
Query: 244 ggtttcaatgagaggccctgattgaaaaagtaagatggcaaaaactgagaaagaaaacag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtttcaatgagaggccctgattgaaaaagtaagatggcaaaaactgagaaagaaaacag 503
Query: 304 aaggcaaactctggtctctgtatgtgcacaaacacagaagtgcagatgctcacgtgaaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggcaaactctggtctctgtatgtgcacaaacacagaagtgcagatgctcacgtgaaca 563
Query: 364 catacatacagcacacacatgtaagtacacatacatatggcacacatgtaagtacacaac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catacatacagcacacacatgtaagtacacatacatatggcacacatgtaagtacacaac 623
Query: 424 aaagtaaatcatgcctaaggacacttaaatcataa 458
|||||||||||||||||||||||||||||||||||
Sbjct: 624 aaagtaaatcatgcctaaggacacttaaatcataa 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_b02.g1 MSMg01no118_b02.g1 CHROMAT_FILE:
MSMg01no118_b02.g1 PHD_FILE: MSMg01no118_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:48 2005
(515 letters)
>mm_chr16_75423634_75424550
Length = 917
Score = 965 bits (499), Expect = 0.0
Identities = 512/517 (99%), Gaps = 2/517 (0%)
Strand = Plus / Minus
Query: 1 cttgcttaatcatcataacaaaccaaactaatttttattttacatgacaaaatataattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cttgcttaatcatcataacaaaccaaactaatttttattttacatgacaaaatataattt 658
Query: 61 aaaattctctcttaagatctactatctcttcattggaaagaccaagatgggcactcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 657 aaaattctctcttaagatctactatctcttcattggaaagaccaagatgggcattcttac 598
Query: 121 aataagatatgaatatagtcattacaaggaaaagacgtaatgaactctgcctgtgtagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aataagatatgaatatagtcattacaaggaaaagacgtaatgaactctgcctgtgtagtc 538
Query: 181 ccaacagcaatcagatccatggacagagaatatagagagtgtaactgtgaataagttatg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 537 ccaacagcaatcagatccatggacagagaatatagagagtgtaactgtgaataagtcatg 478
Query: 241 agttattccattctttcaagagcaacaggaatgaggaaaataatggatttttctctacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agttattccattctttcaagagcaacaggaatgaggaaaataatggatttttctctacct 418
Query: 301 aatttttattttcaaatttctaaaaagaatgtttacaaaagattaaaataattgatggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aatttttattttcaaatttctaaaaagaatgtttacaaaagattaaaataattgatggca 358
Query: 361 tgactttgctgtaagtggtaaatgttactttattttggggttcatt--tttttttgagtt 418
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 357 tgactttgctgtaagtggtaaatgttactttattttgtggttcattattttttttgagtt 298
Query: 419 tcataaaataagcaataaatacactgactttctattgcatgaagaatgttgttaatgtca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcataaaataagcaataaatacactgactttctattgcatgaagaatgttgttaatgtca 238
Query: 479 atgttacaaagaaagctagtaggtttcaagatcagag 515
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 atgttacaaagaaagctagtaggtttcaagatcagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 917
Length adjustment: 10
Effective length of query: 505
Effective length of database: 907
Effective search space: 458035
Effective search space used: 458035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
