Query= MSMg01no118_c05.b1 MSMg01no118_c05.b1 CHROMAT_FILE:
MSMg01no118_c05.b1 PHD_FILE: MSMg01no118_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:53 2005
(405 letters)
>mm_chr16_33187116_33187919
Length = 804
Score = 658 bits (340), Expect = 0.0
Identities = 358/364 (98%), Gaps = 1/364 (0%)
Strand = Plus / Plus
Query: 6 aattccagcacagctcggactatatatcaccctgtatcacctaatatgcaaatctatgtc 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 206 aattccagcacagctaggactatatatcaccctgtatcacctaatatgcaaatatatgtc 265
Query: 66 tatgtgaaatatgcaggcatgagcctacagaagtgagaagagtaggctaactttgtaatt 125
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 266 tatgtgaaatatgcaggcatgaacctacagaagtgagaagagtag-ctaactttgtaatt 324
Query: 126 ggcaatggggattgaagtcaagtcagtgtaactctccccctttgtgatttttttcatttt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggcaatggggattgaagtcaagtcagtgtaactctccccctttgtgatttttttcatttt 384
Query: 186 atttttttatggctgtgaatgtttgcctgcatgtatgtatgtatgtatgtatgtttgcat 245
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttttttatgggtgtgaatgtttgcctgcatgtatgtatgtatgtatgtatgtttgcat 444
Query: 246 atgtgtgcactggctctattgaatctagaagaaggcatcagatcctctggacctggactc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgtgtgcactggctctattgaatctagaagaaggcatcagatcctctggacctggactc 504
Query: 306 atcatggagctgccacatggcttctgggaaccaaacccaggtcctctggaagagcagcta 365
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcatggagctgccacatgggttctgggaaccaaacccaggtcctctggaagagcagcta 564
Query: 366 gtgt 369
||||
Sbjct: 565 gtgt 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 804
Length adjustment: 9
Effective length of query: 396
Effective length of database: 795
Effective search space: 314820
Effective search space used: 314820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_c05.g1 MSMg01no118_c05.g1 CHROMAT_FILE:
MSMg01no118_c05.g1 PHD_FILE: MSMg01no118_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:53 2005
(593 letters)
>mm_chr16_33346702_33347694
Length = 993
Score = 1056 bits (546), Expect = 0.0
Identities = 561/566 (99%), Gaps = 1/566 (0%)
Strand = Plus / Minus
Query: 29 aacactgaaggaagtcaggacaggacctcaagcagggcagaaacctggaggcgggggctg 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 aacactgaaggaagtcaggacaggacctcaagcagggcagaaacctggaggcgggggctg 934
Query: 89 atgcagaggccatggagggtgctgcttactgccgtgctcctcatggctcagcctttctta 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 atgcagaggccatggagggtgctgcttactgccgtgctcctcatggctcagcctttctta 874
Query: 149 gagaacctgggaccaccagcccagggatagcctcaatgattaagcgctgcacagtccgac 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gagaacctgggaccaccagcccagggatagcctcaatgattaagcgctgcacagtccgac 814
Query: 209 attatggaggctccttcctcttggatgactctagctggcgtcaagctgagagaaacctag 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 attatggaggctccttcctcttggatgactctagctggcgtcaagctgagagaaacctag 754
Query: 269 gcagcacattcatataggattggctaacacagattggtgctgtctccagggagaaatgaa 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gcagcacattcatataggattggctaacacagattggtgctgtctccagggagaaatgaa 694
Query: 329 acttgagcacgtattttggtttcaaagagtgctgaccctggatagatttgaattgatgcc 388
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 693 acttgagcacgtattttggtttcaaaaagtgctgaccctggatagatttgaattgatgcc 634
Query: 389 aagtgacttctttccattttttaaaatggagctttgtcttatttaaccctttgataggaa 448
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 633 aagtgacttctttccattttttaaaatggagttttgtcttatttaaccctttgataggaa 574
Query: 449 gactgtttacattccccaggcttatactttgctctgtcaatccacatccctgatgacaat 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gactgtttacattccccaggcttatactttgctctgtcaatccacatccctgatgacaat 514
Query: 509 gaaggattcagaatgttgcctttatgtttttttcaaa-ttctcttttttgagatcataat 567
|||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||
Sbjct: 513 gaaggattcagaatgttgtctttatgtttttttcaaaattcttttttttgagatcataat 454
Query: 568 atagttatatcacttctcccttccct 593
||||||||||||||||||||||||||
Sbjct: 453 atagttatatcacttctcccttccct 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
