Query= MSMg01no118_e13.b1 MSMg01no118_e13.b1 CHROMAT_FILE:
MSMg01no118_e13.b1 PHD_FILE: MSMg01no118_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:05 2005
(648 letters)
>mm_chr16_85933749_85934797
Length = 1049
Score = 1156 bits (598), Expect = 0.0
Identities = 634/646 (98%), Gaps = 1/646 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttcagttc-catttaaaaatcaacattattgaacaagtttagttacaaagcc 62
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ggaattctttcagttcacatttaaaaatcaacattattgaacaagtttagttacaaagcc 790
Query: 63 aattgtacttcatttacaaattcctaatgtattctatttctattgaagatttgtttcacg 122
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 agttgtacttcatttacaaattcctaatgtattctatttctattgaagatttgtttcacg 730
Query: 123 atccataacggaggtaaacaattcacttaaatacagtcatgtcagtctcacctgtgggga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atccataacggaggtaaacaattcacttaaatacagtcatgtcagtctcacctgtgggga 670
Query: 183 atatttgcatatcacacaatttcagacatttacaagagttttgttttttgttttccctta 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 669 atatttgcatatcacacaatttcagacatttacaagagttttgttttttgtttttcctta 610
Query: 243 caatgaatgggacttttgtggtgaaaaatatcacttcaactggaatcattcagacaggta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 caatgaatgggacttttgtggtgaaaaatatcacttcaactggaatcattcagacaggta 550
Query: 303 ctttatattttcatttcctcttatcttcagtatattagtaagtttgtaaataaagaactt 362
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 549 ctttatattttcatttcatcttatcttcagtatattagtaagcttgtaaataaagaattt 490
Query: 363 ttatgttccaaacacttcactgtgtaactcacaaaagtatacatgttttcaggaacccat 422
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 489 ttatgttccaaacactccactgtgttactcacaaaagtatacatgttttcaggaacccat 430
Query: 423 gagatcaatgattgaacggcattttgaaacaactttgagaactgcagcagccttttggga 482
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 429 gagatcaatgattgaacagcattttgaaacaactttgagaactgcagcagcctttttgga 370
Query: 483 acccactaggtcactaatgcacttccatcattcaagcttgagatagctcaggttcccaga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 acccactaggtcactaatgcacttccatcattcaagcttgagatagctcaggttcccaga 310
Query: 543 cccacatggttttacaaactagcgccatctgtttaccattcgccatttcctatgacctac 602
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 309 cccacatggttttacaaactagtgccatctgtttaccattcaccatttcctatgacctac 250
Query: 603 ttcctaccacttttaagaaaaccatcaaagaacatccatctgggtt 648
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttcctaccacttttaagaaaaccatcaaagaacatccatctgggtt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_e13.g1 MSMg01no118_e13.g1 CHROMAT_FILE:
MSMg01no118_e13.g1 PHD_FILE: MSMg01no118_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:05 2005
(338 letters)
>mm_chr16_85851306_85852043
Length = 738
Score = 542 bits (280), Expect = e-158
Identities = 313/324 (96%)
Strand = Plus / Plus
Query: 1 tagatgtatttcatttgcgacactgtgaggatggaaccgtgagctagggtgtgggaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagatgtatttcatttgcgacactgtgaggatggaaccgtgagctagggtgtgggaaagc 260
Query: 61 acagtggatatcagagaggatgatgggatatgatcccgtggaaccccgaaaaaccggaga 120
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagtggatatccgagagaatgatgggatatgatcccgtggaaccccgaaaaaccggaga 320
Query: 121 agatactgtttctgagtttatggtgaacagaataatgttagcgaattttcagcaaagaag 180
||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 321 agatactgtttctgagtttatggcgaacagagcaatgtcagcgaattttcagcaaagaag 380
Query: 181 tggaaggatttgactaaaaggttttcccaggaacagtcttgctgttgatggaatcaggaa 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaaggatttgagtaaaaggttttcccaggaacagtcttgctgttgatggaatcaggaa 440
Query: 241 gcctcatcaggaggttttggttgtggttcaggtacagtgcttaggtgggggtttggccct 300
||| || |||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 441 gccccaccaggaggttttggttgtggttcaggtacagtggttaggtgggggtttggtcct 500
Query: 301 gactggcagcagtgaaggagtgag 324
||||||||||||||||||||||||
Sbjct: 501 gactggcagcagtgaaggagtgag 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
