Query= MSMg01no118_i06.b1 MSMg01no118_i06.b1 CHROMAT_FILE:
MSMg01no118_i06.b1 PHD_FILE: MSMg01no118_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:23 2005
(324 letters)
>mm_chr16_87826999_87827725
Length = 727
Score = 563 bits (291), Expect = e-165
Identities = 315/323 (97%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 5 gaattccttactt-tccacagactacgtgttccagcacacagtttctttgaagttgcagc 63
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattccttacttccccacagactacgtgttccggcacacagtttctttgaagttgcagc 264
Query: 64 aaccactgtctgtccagttctcggaggcagggccatcactgtagcttttgatgccatgtg 123
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaccactgtctgtcaagttcttggaggcagggccatcactgtagcttttgatgccatgtg 324
Query: 124 aagttctgcttggccttccgtcctctaaggacaggtgaactgagggtaccatctcactcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagttctgcttggccttccgtcctctaaggacaggtgaactgagggtaccatctcactcc 384
Query: 184 cctgccctcatttgcatctgaaacacatacccactgcgacactgttttcccca-tcccca 242
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 cctgccctcatttgcatctgaaacacatacccactgcgacactgttttcccccgtcccca 444
Query: 243 tccattcaacaattaagctacaataaatttaggttttaggaaaaaa-tatgttgatatgt 301
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 tccattcaacaattaagctacaataaatttaggttttaggaaaaaaatatgttgatatgt 504
Query: 302 ttcaaaagtgcaaatgatacaaa 324
|||||||||||||||||||||||
Sbjct: 505 ttcaaaagtgcaaatgatacaaa 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 727
Length adjustment: 9
Effective length of query: 315
Effective length of database: 718
Effective search space: 226170
Effective search space used: 226170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_i06.g1 MSMg01no118_i06.g1 CHROMAT_FILE:
MSMg01no118_i06.g1 PHD_FILE: MSMg01no118_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:23 2005
(175 letters)
>mm_chr16_87914056_87914630
Length = 575
Score = 317 bits (164), Expect = 2e-91
Identities = 172/175 (98%)
Strand = Plus / Minus
Query: 1 acaaatcacggaagaacaatgacattgagcaggngagtcatctctccctaagacagggta 60
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 375 acaaatcacggaagaacaatgacattgagcaggtgagtcatctctttctaagacagggta 316
Query: 61 gtttttactttgaatttgctgtctgaagtttgagaatgttaaggatgctttccctgtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtttttactttgaatttgctgtctgaagtttgagaatgttaaggatgctttccctgtttg 256
Query: 121 taacagtctattgaattagatgcccagaagagtcatttctgagttagagcaaaga 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 taacagtctattgaattagatgcccagaagagtcatttctgagttagagcaaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
