CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAGAGATATTCTCATTGAAAAATCTCAACATTTATATATTTTCTGCCTTT
CATTTATTGGCAAGATTATTTCTTCTCTTCACTGTGAACTTCTCACTTTT
TTCTGGTACCATTTTCTATTATTTTATATTGCAACTATTGCACTTTAAAA
CACATTAGATAGTAAACTAATAACATATTTCCCAAAATAAAAGTATGTAC
ACCCTATCATTCAGCACACTTCTGTGTAAGGAACAGTTATCTTAGTATAA
TCTTCATATGTTAATCCAGTATTTATTATGGCTCTAATTAGTATCCATTG
ATAATATCTTCACATATTTTGGGCAAAGGATTATAGCATATATTTGACAT
GTCTTGAATCTGCATACCAAAATTAGTAAATATTTTACAGCATAAATTTA
GTAACTTTCATATCATATTTGAAGGTTACTAGAAAGTAATATTTGCTCTT
CTGTCCCCGTATTTCTCAACTTTGGTGGTGTTCCCTTTCATTCTATTACC
CTTCCCTGTGCCTTTTTATGTCTCTCATTGAAAAATAGGCTTCTACAGGA
TAAGAATAAAATAAAATACTATATGATAAAACAAAAACTAACACATCCGA
AGTGAACAAACTAAACAAACAGATGCAGGGAAAGCCCTACAGAAGCCACA
TGAATTATA

AATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTAGGGTAACAAGCAGAAGAGCCCAAGGGA
GGAAGCTTCGATCCTAATTGGAAGGGAGAAGAAAGCAGAGCGGCACAGGA
ATCGGAATGAACTGGGTAGGAGAGGGGAGGGGTAGGGGAAACTCGTCCCC
CCCCCTTCTCTCTCCCCCCCCCCTCCTCCCCTCCCCCCCTTTCTCTCCCC
CCCTCCCTTCCCCCCCCCCCCCCTCCCCCTTTCCTCCCCCTTCCCCTTCC
CCCCCCCGCCTCCCCCCCTCCTTTTCTTCTTTTCCCCCCCCCACATCCTC
CCCTCCCCCTTTCTCCTTTTTCTCCCCCCCCCCCCCCCCCCCTCTCTTTT
CCTCTCCTCCTTCTTTCCCCCCTTCCCCCCTTCCTCCCCTCCTCCTCCCC
CCCCCCCCTCTCCCCTCTTCCTCTCCCCCCCCCCCCTTTCCCCCCCCTTC
CCCCTTTCCCCCCTCCCCCTCCCCTTTTCCCCTCCCTTCTTTCCCCTCTT
CTCTCCCCCCTTTTCTCCTTTCCCCTTTCCCCCCCCCCCCCCCCCTTCCT
TCCCCCTCTTTTTTCCCCTCTTCTTCTCCCCTCTTTTCCTTTCTTCCTCT
CCTTTTTTCCCCTCCCCCCTTTTTCCCCCCCCCTTTTTCCCTTTTTTTCT
CCTTTTCTCCCCCTCTCTCTTTTCCCCCCCCCTTTTCCTCCCCTCTCCCC
C

Query= MSMg01no119_n13.b1 MSMg01no119_n13.b1 CHROMAT_FILE:
MSMg01no119_n13.b1 PHD_FILE: MSMg01no119_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:06 2005
         (523 letters)



>mm_chr16_54644279_54645202
          Length = 924

 Score =  975 bits (504), Expect = 0.0
 Identities = 519/524 (99%), Gaps = 1/524 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaaaaatctcaacatttatatattttctgcctttcatttattggcaagattatttcttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaaaatctcaacatttatatattttctgcctttcatttattggcaagattatttcttc 260

                                                                       
Query: 61  tcttcactgtgaacttctcacttttttctggtaccattttctattattttatattgcaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttcactgtgaacttctcacttttttctggtaccattttctattattttatattgcaac 320

                                                                       
Query: 121 tattgcactttaaaacacattagatagtaaactaataacatatttcccaaaataaaagta 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tattgcactttaaaacacattagatactaaactaataacatatttcccaaaataaaagta 380

                                                                       
Query: 181 tgtacaccctatcattcagcacacttctgtgtaaggaacagttatcttagtataatcttc 240
           ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 381 tgtacaccctatcattcagcacatttctgtgtaaggaacagttatctcagtataatcttc 440

                                                                       
Query: 241 atatgttaatccagtatttattatggctctaattagtatccattgataatatcttcacat 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 atatgttaatccagtatttattatggctctaattagtatccattgataatatcttcacgt 500

                                                                       
Query: 301 attttgggcaaaggattatagcatatatttgacatgtcttgaatctgcataccaaaatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attttgggcaaaggattatagcatatatttgacatgtcttgaatctgcataccaaaatta 560

                                                                       
Query: 361 gtaaatattttacagcataaatttagtaactttcatatcatatttgaaggttactagaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaaatattttacagcataaatttagtaactttcatatcatatttgaaggttactagaaa 620

                                                                       
Query: 421 gtaatatttgctcttctgtccccgtatttctcaactttggtggtgttccctttcattcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaatatttgctcttctgtccccgtatttctcaactttggtggtgttccctttcattcta 680

                                                       
Query: 481 ttacccttccctgtgccttttt-atgtctctcattgaaaaatag 523
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 ttacccttccctgtgccttttttatgtctctcattgaaaaatag 724


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 924
Length adjustment: 10
Effective length of query: 513
Effective length of database: 914
Effective search space:   468882
Effective search space used:   468882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)