Query= MSMg01no120_o05.b1 MSMg01no120_o05.b1 CHROMAT_FILE:
MSMg01no120_o05.b1 PHD_FILE: MSMg01no120_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:29 2005
(302 letters)
>mm_chr16_23841280_23841983
Length = 704
Score = 464 bits (240), Expect = e-135
Identities = 287/306 (93%), Gaps = 8/306 (2%)
Strand = Plus / Minus
Query: 1 cccttgcacctactacgaagactaatggctacagtaatataagagggacttgagatgggc 60
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 388 cccttgcacctactatgaagactaatggttacagtaatataagagggacttgagatgggc 329
Query: 61 tggaacattgatgtaagggaaccggaagacatgatgctgtcccacacactctacaaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tggaacattgatgtaagggaaccggaagacatgatgctgtcccacacactctacaaggtg 269
Query: 121 gaaaggagcaacactcaccctgtcctctaaccctaccacaaacagacata--catgtacg 178
||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 268 gaaagaagcaacactcaccctgtcctctaacccaaccacaaacagacatatacatgtaca 209
Query: 179 taaaaatt--aaaaaaaaaaaggtatcatgttgaaaccagagaataaccctcaccagaca 236
|||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 208 taaaaattttaaaaaaat----gtatcacgttaaaaccagagaataaccctcaccagaca 153
Query: 237 ctaaatctggaagtgttcacagactttcaagcttccagacctttgaaaaatacactattg 296
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 152 ctaaatctggaagtggtcacagactttcaagcttccagacctttgaaaaatacactttta 93
Query: 297 ttgtct 302
||||||
Sbjct: 92 ttgtct 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 704
Length adjustment: 9
Effective length of query: 293
Effective length of database: 695
Effective search space: 203635
Effective search space used: 203635
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_o05.g1 MSMg01no120_o05.g1 CHROMAT_FILE:
MSMg01no120_o05.g1 PHD_FILE: MSMg01no120_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:29 2005
(114 letters)
>mm_chr16_23731055_23731568
Length = 514
Score = 213 bits (110), Expect = 3e-60
Identities = 113/114 (99%)
Strand = Plus / Plus
Query: 1 aggaagggaggcaaaagacatgggttgcctgttgcaacaataggatcatgatgaccacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaagggaggcaaaagacatgggttgcctgttgcaacaataggatcatgatgaccacaa 260
Query: 61 tagtgtgcatgtagatgggtttaaggatcttatgtctaaatcctcactttatag 114
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtgtgcatgtagatgggtttaaggatcttatgtctaaatcctcactttatag 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 514
Length adjustment: 8
Effective length of query: 106
Effective length of database: 506
Effective search space: 53636
Effective search space used: 53636
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
