BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-122D09.T7 (MSMg01no122_d09.b1) | MSMg01-122D09.TJ (MSMg01no122_d09.g1) |
ACC | AG332130 | AG332131 |
length | 1,161 | 1,151 |
length of high quality (start - end) | 529 (125 - 653) | 467 (122 - 588) |
definition | CHROMAT_FILE: MSMg01no122_d09.b1 PHD_FILE: MSMg01no122_d09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:30:25 2005 | CHROMAT_FILE: MSMg01no122_d09.g1 PHD_FILE: MSMg01no122_d09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:30:25 2005 |
singlet/doublet | doublet | doublet |
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BLAST hit | unique | unique |
---|
Map location. | (25,511,298 - 25,511,826) | (25,351,316 - 25,351,782) |
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sequence | CTCTTCTTTGTCCACTCGGCGCTATAXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCAATATAACTTCACCCTTAAAGAGCATGAAATCATCCTTTG
CTGGAAGTGGACCCCTTTGAGTTGTATCTTATAGAAGTCAAAAATCAAAT
ATCCTGGAATTGATCTATGCTTCAGGAATATGATTCTCCTTTCTTGCCTT
TGTTGACCTTTCTAGTCCTACTAGGCAAGGGTGTGTCAGTGTGCTCAGCC
ACTCAAAAGTTCATCTTTGTGTCAAATTAGATCCACCAATAAGTGCTTGA
GCAGTGGCTTCATGCTTGTTACATGACGCAGCCACTTTCAGCACATGTTA
TAGCACAGTGGTCTTCTGAAGCCATAGGAGATACAATTAGTAGCCATTGA
TACTAAGGCTGGGATGCCATTCTCCAGCAAATGATGTAAAACTGAGTGGG
TGAGCACTGAATGGCCCTACCCCCAGTAGGCAGAACAAAGAAGTACAAGA
AAGAAGAGCAACCAGAGTGTGTAATTTACCATCACAATTATCACCACTCG
GGGGATCTGAATTTCATATCTCAACATTATTGGTCTTTGTATATTTCAAC
CTCCCATTTTCATGCAATGTATTATTGGAAATGAATAGTAGATAAAGATG
TGGTCACAGAGCTTATAATAATAAAATAGAAAACTAGAATAAGTTATAAT
AATAAATGGAATGATAAATTATTTTTTGAAAACACAGAGAGGAAGCTAAA
ATGAATGTGTCCTTCTATTTTTTGTTCTGGATTTTTTTGCTTTGTACTGT
ATTTCACAGGGTAGACAGTGATATGGAGCTCTGATTCAATGAAAATGTGT
AAGTGTCTATAAAAAGGGTATTGGTGTAGAGGGCCTCAGTGGGTAAATAA
TGGTCTGCTTGAATGAAGCTGGAGTACCCGCAATTTCCAAATCCTATCCT
TCCCTTAATTGCCTTGGCCCATGGAATCTTCCGCTACAATTGAGGTTGAC
CTTACATAATGTGAAATCTATTGAACTCCCTTAATTAAAAACCCTAATTT
TTTTCCTTCCAGGGTTTCTAGCGAAAAAAACACTCTCTTGTTCATATAGG
AAAAGTGGTTCTAATAATCTACACACCCCTTTTGAAAAATATTTATATCT
TGTTTCCTCTA
| TCCCAACCACGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCTTTAAACGCTTTACCTAAAATTTTAATTTCTC
AATAGGCCCTTAAAATTCCCTTGTACATATCTACCACATTGTCATTATCC
ATCCATTGATTGATGAACATCTAGGCTGCTTCCATTTCCTAGCTATTGGG
AATGCAGCTGCAATGTACATGGCCATTGTACAAGCAAGTGTCTGCAGAAG
AGGATATTGAGTCCTTTGGGTATATTCCAGGAGTGGCATATCTGGATCAT
ATGATAGGTCTACTTTTATCTTTTTGAGAAGTCATCACATCAGTTTCGCC
AATGGCTGCACCTGCTTGAAACTTCTCATCAGTTTTCCCCTCTATTTTTA
TGTAGTCTAGATGGCATGAGATGAAATCTCAAACCAGGACATCTTTTGCT
CACAAATCACTCCCCAAGTTCACCTAAAGCAAAAAAAAAAAAGAACTTTT
GCACTGCCAAGGAAACAAATCAATTAAGTAAACAAGTCCACAGAGTGGGA
GGAATCTTTGTCAGTTGTATGTCCAGCACAGGTGAATAGCCAGAGTACAC
AAAGATCTTAAGAATTCAAGAAAGCAAACTACCTAATTTAACAATGAGCT
GTATCCCCGATGAGAAAGCCTGTAAAGGAAATGAAAATGGCCAAGAAATA
AGTTTAAAAAATAAAAACTGTTTATCAACCTTATCAATCAGAAAAATACA
AAATATTTTCTTAAGTTTAAAAGTAAACTATTTTAGTGGCTAGGGAAACA
ACTGTCCTAATGACCGTGTTTGCTTATGCATGTATGAAAAAGCCAAGTCT
AAATTCTTCCAAAACCCCACATAAAACTGGGTCATTGTGGTCAAAAATCC
AATAATTCTCACACTAACGAGGAAATAGATCAGAAACAATTTCCGGAAAG
CTATTCTGTTACATTCTTTTCTAATCCAATTCCGGAGAAAAATCCAGTTC
TTCCAGTGAAAATGACCCCTGCCCTCTCTAAAAATTCAATTTTAGATAAA
ATCTAACCTGGGGCAACTCCATCGCGATTTTTGAACTCCCCACCTTTGCC
CAAGGCTCCTTAAATTTTTTGGCTCTTGGTTCCNCCTTTGTCCCTTGAAA
A
|
quality values | Open.Hide. 6 6 10 10 17 14 9 8 13 6 6 6 6 9 9 9 11 10 12 14 16 13 9 8 8 8 8 13 15 20 20 18 17 17 20 18 21 29 36 36 36 34 37 36 36 34 47 42 48 39
40 39 46 57 57 57 59 50 50 50 50 36 36 50 50 50 50 42 37 21 19 8 7 8 8 13 10 10 11 12 15 12 12 12 12 12 22 24 34 37 57 57 57 50 57 57 50 50 53 50
50 47 47 41 48 42 42 42 41 25 25 12 12 12 15 13 12 13 10 10 11 11 15 15 22 22 31 31 36 36 42 53 50 50 50 57 57 43 43 32 32 43 43 43 57 57 54 54 54 57
57 57 57 57 57 48 48 48 59 57 57 59 57 50 50 50 47 50 47 57 47 57 47 57 57 68 57 57 57 57 57 57 54 54 54 54 54 54 57 57 57 57 59 59 59 57 57 57 57 57
57 57 57 57 57 57 54 54 54 57 57 57 57 57 57 57 57 57 57 68 57 57 52 52 52 52 52 52 57 52 52 52 57 57 57 57 57 54 54 52 59 52 52 52 43 57 38 57 57 57
57 57 57 52 52 57 57 57 43 44 35 39 39 57 57 57 57 57 43 43 43 57 57 57 57 57 44 44 31 31 31 44 44 57 57 57 57 57 57 62 62 44 43 35 43 43 62 59 62 54
62 62 62 62 52 52 52 62 62 62 52 52 62 52 52 52 62 62 62 62 62 62 62 62 62 52 45 43 43 35 41 39 62 62 62 62 62 62 62 52 62 62 62 43 52 62 62 62 62 62
62 52 52 52 62 62 62 62 62 54 54 62 62 62 62 68 62 62 62 43 39 39 39 43 43 39 39 43 43 43 43 43 43 39 43 43 62 62 52 43 39 39 12 12 12 12 12 21 13 17
18 29 39 39 39 39 39 39 43 44 43 39 39 39 43 43 43 39 62 62 44 44 43 43 39 43 43 52 52 52 52 62 62 62 62 62 62 62 62 62 62 52 43 43 15 15 12 13 12 13
15 29 20 26 26 44 43 52 52 52 43 38 36 26 26 24 38 32 52 52 52 52 43 43 31 24 24 24 27 32 24 15 15 13 18 18 27 43 43 43 43 31 31 31 43 35 35 38 38 26
35 35 43 38 38 20 20 23 27 43 36 32 24 13 13 32 38 43 52 57 57 45 45 57 57 57 57 57 57 52 43 43 29 29 29 44 44 57 57 59 57 57 52 52 52 52 52 43 44 44
35 35 35 43 43 52 52 52 57 52 54 54 57 57 57 54 54 54 57 47 43 33 29 29 33 33 43 50 57 57 44 43 31 31 20 28 28 32 32 42 48 57 47 59 44 42 42 28 28 24
34 31 35 35 42 39 48 57 57 57 48 48 43 42 37 28 28 22 31 31 31 32 25 32 24 26 14 13 18 19 18 23 41 34 30 30 24 21 17 14 14 14 24 23 28 23 25 25 34 30
31 20 20 12 12 12 17 26 17 15 8 8 8 11 12 28 22 21 22 24 24 24 23 23 22 17 17 11 11 12 15 15 15 12 12 11 10 15 18 21 24 14 14 11 21 10 10 10 13 15
14 17 12 14 13 23 23 23 23 33 29 28 26 23 20 20 23 23 33 28 25 22 29 28 33 33 28 32 32 30 28 28 28 21 19 14 12 10 10 10 12 12 11 9 9 9 10 22 28 30
30 28 18 17 18 18 18 15 14 13 10 10 13 21 31 28 30 28 37 29 18 14 14 15 18 18 37 35 23 25 18 15 8 8 8 13 17 28 28 18 18 12 15 15 9 9 10 10 10 15
10 9 8 19 12 12 12 10 12 9 9 8 8 10 8 13 8 8 8 6 8 6 7 7 6 8 8 10 10 9 9 9 9 10 15 12 12 8 8 6 6 8 6 8 10 11 8 8 8 8
17 10 8 8 6 6 6 6 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 11 17 11 10 10 11 10 10 9 10 9 10 6 8 8 8 8 8 14 9 10
8 8 8 8 8 10 8 8 8 9 9 10 10 10 9 8 7 7 8 10 9 10 10 10 10 11 13 13 8 8 6 6 6 8 8 8 8 8 9 9 9 11 13 9 9 8 8 11 8 8
8 8 8 13 11 10 8 8 8 8 8 9 10 11 12 10 12 19 18 15 22 12 11 11 10 9 9 9 10 10 8 9 8 8 8 8 8 8 8 8 8 8 8 8 10 10 11 11 11 9
8 8 7 8 7 7 8 8 9 8 10 8 8 8 8 8 11 10 8 8 10 11 8 10 8 8 8 8 8 10 12 8 8 8 8 10 9 19 14 10 13 12 9 13 7 7 8 10 10 10
10 13 10 10 10 8 8 6 6 8 8 12 12 12 10 12 10 9 8 8 8 8 8 8 17 19 23 16 10 8 6 6 6 6 8 8 8 8 8 8 8 6 8 7 7 7 7 7 12 13
10 10 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 9 9 9 8 6 6 6 6 6 8 15 13 7 7 6 6 8 8 11 11 9 8 8 8 11 8 10 8 8 8 8 6
6 6 6 8 6 6 6 6 8 6 6 | Open.Hide. 6 6 7 7 6 8 6 9 9 9 6 6 6 6 7 8 9 8 10 10 12 15 19 20 17 19 10 11 12 24 28 28 23 23 28 25 25 15 18 18 10 13 16 32 29 34 31 31 28 28
17 19 17 28 30 37 37 25 25 3 0 0 3 0 3 9 9 10 10 11 12 8 8 8 8 8 8 13 11 11 16 21 30 33 33 36 53 59 59 50 50 50 53 53 53 53 53 44 44 39
50 47 41 39 27 23 12 12 14 14 11 11 10 12 12 19 21 22 20 23 16 22 17 27 36 36 39 39 39 42 42 43 43 43 53 57 57 47 43 48 42 48 48 54 57 57 57 59 57 57
54 54 57 54 57 54 57 57 59 59 59 57 57 57 57 57 50 47 47 47 47 57 57 57 57 57 57 48 43 43 43 43 57 57 57 57 57 57 57 57 47 47 47 57 57 57 50 43 43 50
50 57 57 57 59 43 43 43 44 44 37 39 39 50 50 52 52 52 57 57 52 52 52 52 57 57 57 57 52 52 52 59 52 52 52 52 43 52 52 43 43 57 57 43 43 27 23 23 38 38
39 43 43 52 57 57 57 57 57 57 57 57 47 57 57 57 57 43 37 50 50 52 44 57 54 52 52 52 52 43 43 35 35 35 43 43 52 32 32 12 12 12 32 26 38 39 50 50 57 57
57 57 57 50 50 47 47 43 50 41 43 43 57 59 57 54 54 54 57 59 59 59 59 59 57 57 43 44 44 48 48 57 47 46 46 48 48 48 48 59 59 44 43 43 46 47 48 48 43 47
43 43 39 39 39 48 43 43 43 43 43 43 48 54 57 57 57 57 48 59 59 59 59 59 48 48 48 48 39 39 39 47 43 43 47 59 59 47 30 30 15 15 12 12 12 15 23 28 41 39
39 30 30 43 35 35 37 37 35 35 35 47 47 48 43 43 33 40 25 25 25 40 43 48 48 42 42 39 39 37 39 39 43 41 41 41 32 28 28 28 28 32 39 39 48 41 30 17 14 12
23 15 12 12 18 24 36 43 46 57 57 48 46 42 42 35 35 42 44 36 35 35 35 32 32 30 20 20 27 32 43 50 50 43 43 27 27 23 27 32 32 31 31 31 38 44 59 59 59 43
35 33 43 43 50 38 41 35 43 43 43 35 38 42 42 39 38 42 38 38 33 33 33 43 44 43 33 33 28 38 32 33 29 32 21 13 13 13 27 19 24 19 32 32 43 32 27 20 20 20
24 28 37 43 44 48 50 50 57 44 43 39 35 33 33 32 32 33 35 42 38 28 28 24 24 24 31 35 35 35 35 39 40 41 30 24 24 20 20 32 24 24 13 13 13 15 21 23 23 20
20 20 25 27 24 20 15 15 13 15 13 19 16 29 32 34 32 30 28 23 19 26 19 23 23 32 32 35 35 37 43 39 39 37 30 30 37 37 37 28 21 18 15 15 19 19 13 11 11 16
19 17 18 11 11 12 22 15 22 22 28 24 13 13 13 19 19 18 15 15 16 10 15 15 12 12 13 13 11 16 16 30 28 28 28 14 12 13 12 9 9 9 10 11 19 8 13 8 8 8
8 12 17 26 25 22 22 24 24 20 22 28 28 28 23 23 20 19 24 27 26 21 13 11 11 11 10 10 10 19 20 17 8 8 8 8 8 8 13 10 11 11 21 19 20 16 16 10 10 15
22 15 15 15 15 13 21 10 10 10 9 9 10 8 8 9 15 18 14 12 11 13 15 12 9 9 9 8 8 10 10 15 10 10 8 8 8 9 9 13 13 11 11 11 11 11 16 21 18 15
11 15 15 10 15 13 10 10 10 13 13 13 12 8 8 8 8 9 18 14 10 10 8 8 8 8 9 10 8 8 8 8 8 8 8 9 10 11 10 10 10 10 10 8 8 8 8 10 10 10
10 10 12 12 10 10 13 13 10 10 10 10 13 12 19 12 12 6 6 8 8 8 10 10 10 10 10 10 12 12 12 12 11 8 8 15 13 12 9 9 10 9 10 10 12 8 8 10 8 8
8 8 8 10 11 8 8 8 8 8 8 8 8 8 8 13 9 9 8 8 8 8 8 9 9 9 9 6 8 6 6 8 8 10 10 11 12 11 11 11 13 11 10 8 8 8 8 8 8 8
8 10 8 8 8 8 10 10 8 10 8 8 8 8 6 6 10 10 14 15 15 9 8 8 8 8 11 11 8 8 8 8 8 8 9 9 9 9 10 17 16 12 8 8 8 8 8 8 9 6
6 6 7 10 8 9 9 12 13 10 10 6 6 6 6 15 12 14 12 11 11 11 11 13 12 10 9 9 9 9 14 15 10 8 8 8 8 8 10 10 13 19 13 9 7 7 8 8 8 10
9 8 8 8 8 8 8 8 8 8 8 11 12 12 11 8 8 8 8 8 6 6 6 6 6 6 10 10 24 15 13 9 9 12 10 10 8 10 10 16 9 8 8 8 8 10 8 9 8 8
6 6 8 8 15 15 12 13 8 8 6 6 8 6 6 8 6 10 10 8 8 8 8 8 6 7 7 9 9 8 10 8 3 0 3 8 8 10 8 12 10 10 10 11 12 10 9 9 12 16
12 |