Query= MSMg01no122_k13.b1 MSMg01no122_k13.b1 CHROMAT_FILE:
MSMg01no122_k13.b1 PHD_FILE: MSMg01no122_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:22 2005
(696 letters)
>mm_chr16_25704135_25705230
Length = 1096
Score = 1307 bits (676), Expect = 0.0
Identities = 691/696 (99%)
Strand = Plus / Plus
Query: 1 ctggtgaggaaggtttcttggagctaataggaacatttttagggggcaaaatctactgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggtgaggaaggtttcttggagctaataggaacatttttagggggcaaaatctactgca 260
Query: 61 aatattactggctgaatatggcacaatgcaaagatagtagacagctatgtatttgatttt 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 aatattactggctgaatatggcacaatgcaaagatagcagacagctatgtatttgatttt 320
Query: 121 ctttattgatctagttatagctaataatctgaatcaggctataaccatatgtatgcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttattgatctagttatagctaataatctgaatcaggctataaccatatgtatgcaaac 380
Query: 181 tggtactgcagtagagaccctataatctgaatctacattcattttagtgttgctttatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtactgcagtagagaccctataatctgaatctacattcattttagtgttgctttatgt 440
Query: 241 tgactggttatcaataccatttccaataacctttctagctcttccttccttttgatggtt 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 tgactggttatcaataccatttccaataacccaactagctcttccttccttttgatggtt 500
Query: 301 gaatatatttgacagacttgactctagatatgaactgttgtcattctgactctttggtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatatatttgacagacttgactctagatatgaactgttgtcattctgactctttggtgt 560
Query: 361 catagtcagatccacaaagtgttacttataaagactataggtcttattgttggtcccaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catagtcagatccacaaagtgttacttataaagactataggtcttattgttggtcccaag 620
Query: 421 ttaccaggattatatatatcatcacaatgagttttcttctaaaatcttcattaagttata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaccaggattatatatatcatcacaatgagttttcttctaaaatcttcattaagttata 680
Query: 481 accccaaaaaaactgcttaatatagactaatagaatcagaacaatatagttttcctttga 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acccccaaaaaactgcttaatatagactaatagaatcagaacaatatagttttcctttga 740
Query: 541 agtcacgtcactgttcatcactcttgttttccatcacagttctctagctttctgagtctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtcacgtcactgttcatcactcttgttttccatcacagttctctagctttctgagtctc 800
Query: 601 tgttaccccagtatgaaactgtaccttttgtggttgaatcgtagctatgctttttaagct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgttaccccagtatgaaactgtaccttttgtggttgaatcgtagctatgctttttaagct 860
Query: 661 ctagtagggaagcaaaaactctttgcatgtttgatt 696
||||||||||||||||||||||||||||||||||||
Sbjct: 861 ctagtagggaagcaaaaactctttgcatgtttgatt 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_k13.g1 MSMg01no122_k13.g1 CHROMAT_FILE:
MSMg01no122_k13.g1 PHD_FILE: MSMg01no122_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:22 2005
(686 letters)
>mm_chr16_25856780_25857867
Length = 1088
Score = 1303 bits (674), Expect = 0.0
Identities = 684/688 (99%), Gaps = 2/688 (0%)
Strand = Plus / Minus
Query: 1 tactgttgaatagtgtgcatggatttgcatatgccatattctattttatctagctgtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tactgttgaatagtgtgcatggatttgcatatgccatattctattttatctagctgtgga 829
Query: 61 attctgctatttatcatttccttatttccagttttctctgctagggataaattatgtaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 attctgctatttatcatttccttatttccagttttctctgctagggataaattatgtaca 769
Query: 121 caacttattgtggagacatgaatttatgcttttctgaaataacttatttttctgggttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 caacttattgtggagacatgaatttatgcttttctgaaataacttatttttctgggttga 709
Query: 181 ccatgtactgtggaaccctgctaactttactcacttgttccagcagcttacaatcatagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ccatgtactgtggaaccctgctaactttactcacttgttccagcagcttacaatcatagc 649
Query: 241 aactgcaaacagagtcttacttctaccaaaggctaatagtctaggccagagagtcctcct 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 648 aactgcaaacagagtcttacttctaccaaaggctaaaagtctaggccagagagtcctcct 589
Query: 301 gctaggctttgagagatctttttccttgtatatgaacctttaaataaactgaaacgtact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gctaggctttgagagatctttttccttgtatatgaacctttaaataaactgaaacgtact 529
Query: 361 g--aaaaaaaatcattaatttaatgtactgtgcctatgttttaacttaaaaacatgatga 418
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gaaaaaaaaaatcattaatttaatgtactgtgcctatgttttaacttaaaaacatgatga 469
Query: 419 ctaatctggtcttattctatcccatttattaacaccaaccattcatttctttttatccac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ctaatctggtcttattctatcccatttattaacaccaaccattcatttctttttatccac 409
Query: 479 acctcactgtctgtctcgagacatgagaacgtttcttccttttgttagtattttgagaga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 acctcactgtctgtctcgagacatgagaacgtttcttccttttgttagtattttgagaga 349
Query: 539 aagcctctctgctgtgttctctcctgtgtgtaaggtttcccacagtgagttctgtggtat 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gagcctctctgctgtgttctctcctgtgtgtaaggtttcccacagtgagttctgtggtat 289
Query: 599 tttacctcagatactgatctaactcttctgcattaaaaataatgccattccttatgctat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tttacctcagatactgatctaactcttctgcattaaaaataatgccattccttatgctat 229
Query: 659 ttacatctcgtttaacagcctcttctcc 686
||||||||||||||||||||||||||||
Sbjct: 228 ttacatctcgtttaacagcctcttctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1088
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1078
Effective search space: 728728
Effective search space used: 728728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
