Query= MSMg01no124_g11.b1 MSMg01no124_g11.b1 CHROMAT_FILE:
MSMg01no124_g11.b1 PHD_FILE: MSMg01no124_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:27 2005
(536 letters)
>mm_chr16_85026536_85027472
Length = 937
Score = 938 bits (485), Expect = 0.0
Identities = 522/541 (96%), Gaps = 16/541 (2%)
Strand = Plus / Plus
Query: 1 gatagaaactaaatgtcttactggggccccat---aaccgattcccctgcattatgtatc 57
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 201 gatagaaactaaatgtcttactgggg---catgaaaaccgattcccctgcattatgtatc 257
Query: 58 tttgctatcatcttatcttagacattcggaacctggatcaccctcttggaattgcagatc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tttgctatcatcttatcttagacattcggaacctggatcaccctcttggaattgcagatc 317
Query: 118 catgaaataattaagatttacctaggtaatgtattgaaaatatgcattactatataaatg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 catgaaataattaagatttacctaggtaatgtattgaaaatatgcattactatataaatg 377
Query: 178 aacttgaatgttgacttttcagaataatttagc-aacatcttctactcgcacacatccat 236
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 378 aacttgaatgttgacttttcagaataatttagcaaacatcttctactctcacacatccat 437
Query: 237 ggcctatgtcatcactgaaggactacttacagacacgctgtaggcagaagatttaccccc 296
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggcctatgtcgtcactgaaggactacttacagacacgctgtaggcagaagatttaccccc 497
Query: 297 ttaaccagtggcttttact-gggttgtactggtaatagataatattactgggtaaagtgc 355
||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||
Sbjct: 498 ttaaccagtggcttttactagggt-gcactggtaatagataatattactgggtaaagtgc 556
Query: 356 tttacaaaatctgtctggtttaattgatgcctgattacagcaggctctgtactcagtaat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttacaaaatctgtctggtttaattgatgcctgattacagcaggctctgtactcagtaat 616
Query: 416 cttactctacagacctgtttaagaaagctgtgagagtaaccaatggacgaggagtgatga 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cttactctacagacctgtttaagaaagctgtgagagtaaccaatggacgaggagtgatga 676
Query: 476 tgagcctactatcctcctggcccagtgtgctgctgcagatgggccatctatctacaggca 535
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 677 tgagcctactatcctcctggcccagtgtgctgctgcagat-------ctatctacaggca 729
Query: 536 a 536
|
Sbjct: 730 a 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 937
Length adjustment: 10
Effective length of query: 526
Effective length of database: 927
Effective search space: 487602
Effective search space used: 487602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_g11.g1 MSMg01no124_g11.g1 CHROMAT_FILE:
MSMg01no124_g11.g1 PHD_FILE: MSMg01no124_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:28 2005
(324 letters)
>mm_chr16_85151496_85152219
Length = 724
Score = 603 bits (312), Expect = e-177
Identities = 321/324 (99%)
Strand = Plus / Minus
Query: 1 ttgtttatcacatatcaaagcataccaggcagggataattgagagatcttctgataggtc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 524 ttgtttatcacatatcaaagcataccgggcagggataattgagagatcttctgataggtc 465
Query: 61 atgtggtttgtagtctctgcccaggcttctggagtgggtgggccgtgctcctgcctcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 atgtggtttgtagtctctgcccaggcttctggagtgggtgggccgtgctcctgcctcagg 405
Query: 121 tagcagtgacttctgtctgccaggatcagttctgtgtgactgtcctgtaggtgtgcatag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 404 tagcagtgacttctgtctgccaggattagttctgtgtgactgtcctgtaggtgtgcatag 345
Query: 181 catccgctcaccatcaacactttatatttctctgcccaggtccctagaaaatagattcac 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 344 catccgctcaccatcaacactttatatttctctgcctaggtccctagaaaatagattcac 285
Query: 241 aaagaaaaccgtcttgtactttgtatggtttcaggtgactctgatatttcatgaattcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aaagaaaaccgtcttgtactttgtatggtttcaggtgactctgatatttcatgaattcac 225
Query: 301 aaaacccgagttgaacacagcacc 324
||||||||||||||||||||||||
Sbjct: 224 aaaacccgagttgaacacagcacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
