Query= MSMg01no124_g21.b1 MSMg01no124_g21.b1 CHROMAT_FILE:
MSMg01no124_g21.b1 PHD_FILE: MSMg01no124_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:31 2005
(398 letters)
>mm_chr16_60327407_60328204
Length = 798
Score = 520 bits (269), Expect = e-152
Identities = 324/353 (91%), Gaps = 18/353 (5%)
Strand = Plus / Minus
Query: 1 ttaatataatgttactgtttacatttttatatgtatttttcaatccaaacaaccatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttaatataatgttactgtttacatttttatatgtatttttcaatccaaacaaccatggat 276
Query: 61 ggtaggtatctagcaagtgataattgatttttcagctattttattttttgatcaacaagt 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 275 ggtaggtatctagcaagtgataattgatatttcagctattttattttttgatcaacaagt 216
Query: 121 ttttaactaatgtgctttccttcatcttcttcttccttcttattttccttcttctgtctt 180
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 215 ttttaactaatgtgctttccttcatcttcttc------------ttccttcttctgtctt 168
Query: 181 acacaaacatatacttttaggatttgtttgttttttttttttcatttttttaatcattcc 240
||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||
Sbjct: 167 acacaaacacatatttttaggatttgtttg------ttttttaatttttttaatcattcc 114
Query: 241 attcccttacatcccaaatgataccccacttcccagttattcctccaccaaccccccatc 300
||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||| |
Sbjct: 113 attcccttatatcccaaatgatatcccacttcccagttacccctccaccaaccccccaac 54
Query: 301 ccacatctgcccaatcccctcccccttgcctgtatgagagtactcccccaccc 353
||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 53 ccacatctgcccaattccctcccacttgcctgtatgagagtactcccccaccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_g21.g1 MSMg01no124_g21.g1 CHROMAT_FILE:
MSMg01no124_g21.g1 PHD_FILE: MSMg01no124_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:31 2005
(507 letters)
>mm_chr16_60179890_60180796
Length = 907
Score = 919 bits (475), Expect = 0.0
Identities = 496/503 (98%)
Strand = Plus / Plus
Query: 5 agcatccccagagacttctttaaaatacctttgtttttctcagaaatatatcctttaacc 64
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 agcatccccagagacttctttaaaatacttttgtttttctcagaaatatatcctttaacc 264
Query: 65 tgtttattgttcacttatgttgcctgctgtggttggttccctagtgacactgtagagaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtttattgttcacttatgttgcctgctgtggttggttccctagtgacactgtagagaaa 324
Query: 125 gatggtgggatctggaagaagtggaagctgagggcaagtcacagcagatttaatgacagg 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 325 gatggtgggatctggaagaagtggaagctgagggcaagtcacagtagatttaaggacagg 384
Query: 185 aatactacaggtgtccctgagcagattaggtctctcaggattggctttgcttaaacaaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatactacaggtgtccctgagcagattaggtctctcaggattggctttgcttaaacaaga 444
Query: 245 gtgagctgttataaaagcctgagcctggtctctcattttcgtctctgccatgttcagtct 304
||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 gtgagttgttataaaagcttgagcctggtctctcagcttcgtctctgccatgttcagtct 504
Query: 305 tccacacagtttgttcagcactcttgtgtgtgtacccactatgtgatgctaaatgcactg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tccacacagtttgttcagcactcttgtgtgtgtacccactatgtgatgctaaatgcactg 564
Query: 365 ttgtgagtagcatgaggcaactagatgtagttgtccaattacatctccagaactctgatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgtgagtagcatgaggcaactagatgtagttgtccaattacatctccagaactctgatc 624
Query: 425 taaaatacatttttttcaataaaatactggttctgtgcatttttgttatggttatatata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taaaatacatttttttcaataaaatactggttctgtgcatttttgttatggttatatata 684
Query: 485 acttgactacacacagcatttca 507
|||||||||||||||||||||||
Sbjct: 685 acttgactacacacagcatttca 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
