Query= MSMg01no125_f07.b1 MSMg01no125_f07.b1 CHROMAT_FILE:
MSMg01no125_f07.b1 PHD_FILE: MSMg01no125_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:20 2005
(652 letters)
>mm_chr16_69372234_69373285
Length = 1052
Score = 1222 bits (632), Expect = 0.0
Identities = 644/648 (99%)
Strand = Plus / Plus
Query: 5 gaattcatccagttcccttaagttatgctcagttcttttcagtgtgtgtagtcagtgcaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatccagttccattaagttatgctcagttcttttcagtgtgtgtagtcagtgcaa 264
Query: 65 tgcagttcatagagctcagagtcagttattccaagcacagcaattgaatgagaagccaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcagttcatagagctcagagtcagttattccaagcacagcaattgaatgagaagccaag 324
Query: 125 agaggagagtttgaatcagtcaactgggagaggaattttgggcagaacagctaagttgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agaggagagtttgaatcagtcaactgggagaggaattttgggcagaacagctaagttgaa 384
Query: 185 ccagtcagccacaatttacaaagaattagaaagggtgagattattcagcagtaagcctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccagtcagccacaatttacaaagaattagaaagggtgagattattcagcagtaagcctct 444
Query: 245 gagataccaattttatctggtgaataaaagttacttttatagatattttaataactctca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagataccaattttatctggtgaataaaagttacttttatagatattttaataactctca 504
Query: 305 cactgagatttttctgtagttttattcatctttttgctttgttttgttgtaattccagat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cactgagatttttctgtagttttattcatctttttgctttgttttgttgtaattccagat 564
Query: 365 tttattcaccaagattttggtgacacagagtgatgaactctcatctgagtctctatattt 424
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 tttattcaccaagattttggtgacacagagtgataaactctcatctgagtctctatattt 624
Query: 425 attcaggcataaattactaaaattcccttgaaaaggggaagaaaatgaattattcctacc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attcaggcataaattactaaaattcccttgaaaaggggaagaaaatgaattattcctacc 684
Query: 485 ccatattcaggcttcactgaaaatcatggatgttgttaaaatcatctatgtcttcacagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccatattcaggcttcactgaaaatcatggatgttgttaaaatcatctatgtcttcacagt 744
Query: 545 ttttcaattcattatttgaaaaactattcattagcgcatgtagatatacatccaccaaaa 604
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 745 ttttcaattcattatttgaaaaactattcattagcgtatgtagatatacatccaccaaaa 804
Query: 605 taaacccaatatgaaattgttatttcattatagcatactatttgaaga 652
||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 805 taaacccaatatgaaattgttatttcattatagtatactatttgaaga 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_f07.g1 MSMg01no125_f07.g1 CHROMAT_FILE:
MSMg01no125_f07.g1 PHD_FILE: MSMg01no125_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:20 2005
(210 letters)
>mm_chr16_69536094_69536702
Length = 609
Score = 360 bits (186), Expect = e-104
Identities = 201/206 (97%), Gaps = 1/206 (0%)
Strand = Plus / Minus
Query: 5 gaaagtttggaagctaatgacccaaacgctgatgagcctagggctctggcatctggtgac 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaaagtttggaagataatgacccaaacgctgatgagcctagggctctggcatctggtgac 350
Query: 65 aacactgttggttatgatatcatgttgacaataatttttacaaaaaaagaatacagatgg 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 349 aacactgttggttatgatatcatgttgacaataatttttac-aaaaaagaatacagatgg 291
Query: 125 ccatacaggaaatgtaaatctgaggtagaggttagatatgttctctcatgagatctcacc 184
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 290 ccatacaggaaatgcaaatctgaggtagaggttagatatgttctctcatgagatcttacc 231
Query: 185 cccaagaattaatatttactccagag 210
||||||||||||||||||||| ||||
Sbjct: 230 cccaagaattaatatttactctagag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 609
Length adjustment: 9
Effective length of query: 201
Effective length of database: 600
Effective search space: 120600
Effective search space used: 120600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
