Query= MSMg01no127_c11.b1 MSMg01no127_c11.b1 CHROMAT_FILE:
MSMg01no127_c11.b1 PHD_FILE: MSMg01no127_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:48 2005
(286 letters)
>mm_chr16_35585451_35586136
Length = 686
Score = 526 bits (272), Expect = e-154
Identities = 280/286 (97%), Gaps = 6/286 (2%)
Strand = Plus / Minus
Query: 1 cttcctgggaaacaggccttccctctagtacctcctaagaaggatcagacctgtggatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cttcctgggaaacaggccttccctctagtacctcctaagaaggatcagacctgtggatct 392
Query: 61 ttcagcctttaggcctctgttccaccaaaggaagcaaccccttcacatttgaacagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttcagcctttaggcctctgttccaccaaaggaagcaaccccttcacatttgaacagaaca 332
Query: 121 ttctgactgcggccacatcgtggttcctcgggcccatctagtttcagacggaagacttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ttctgactgcggccacatcgtggttcctcgggcccatctagtttcagacggaagacttca 272
Query: 181 tttctccactacttccctgaagccacaaagacctgccttgttagcaccaggaagggcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tttctccactacttccctgaagccacaaagacctgccttgttagcaccaggaagggcctg 212
Query: 241 gtgtgtgcggtctgctgctgctgctgctgctgtcctccaagctcaa 286
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 211 gtgtgtgcggt------ctgctgctgctgctgtcctccaagctcaa 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_c11.g1 MSMg01no127_c11.g1 CHROMAT_FILE:
MSMg01no127_c11.g1 PHD_FILE: MSMg01no127_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:48 2005
(246 letters)
>mm_chr16_35424081_35424727
Length = 647
Score = 398 bits (206), Expect = e-115
Identities = 227/234 (97%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 1 ctctggaatctcatgccagggaaaaggaaagggcgctcgttggaccaggaaccgggctcc 60
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 201 ctctggaatctcatgccagggaaaaggaaagggcgcttgttggagcaggaaccgggctcc 260
Query: 61 ctgaaacagatttcatccagttctacagtacacactgaagcccagaggacgatgggtcaa 120
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 261 ctgaaacagatttcatccagttctacagtacacactgaaacccagaggaagatgggtcaa 320
Query: 121 tagttggcaggaccaagtttggtcaggactgctttcaggtatccttgatcttctattcaa 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 tagttggcaggaccaagtttggtcaggactgctttcaggtatccttggtcttctattcaa 380
Query: 181 acattcatctcacatcagaaccccaaagatagactggcggcgggg-gggggggg 233
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 381 acattcatctcacatcagaaccccaaagatagactggcgg-ggggcgggggggg 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
