Query= MSMg01no128_a21.b1 MSMg01no128_a21.b1 CHROMAT_FILE:
MSMg01no128_a21.b1 PHD_FILE: MSMg01no128_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:01 2005
(448 letters)
>mm_chr16_35221974_35222821
Length = 848
Score = 859 bits (444), Expect = 0.0
Identities = 447/448 (99%)
Strand = Plus / Minus
Query: 1 taactgatatgatagaacgatgtaatctaataggttaactcaacttaaatatttatctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 taactgatatgatagaacgatgtaatctaataggttaactcaacttaaatatttatctcc 647
Query: 61 taaattttccatttaatattttcagatcatggttgatcacgaataattgaaacttagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 taaattttccatttaatattttcagatcatggttgatcacgaataattgaaacttagagg 587
Query: 121 ggggggaaccctgcagctaagggggtagtgcatagcagttgtctgtcctccgtttcagcg 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gggggggaccctgcagctaagggggtagtgcatagcagttgtctgtcctccgtttcagcg 527
Query: 181 tgggccaggcactaaccttctccagccaattagccagaacaggcaaggctataatgtaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgggccaggcactaaccttctccagccaattagccagaacaggcaaggctataatgtaat 467
Query: 241 aataaataagccctcaagtcccaacagcttaaatcacaaacctggagttctggcttttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aataaataagccctcaagtcccaacagcttaaatcacaaacctggagttctggcttttga 407
Query: 301 aacaagccaagtggctctactctatcttgcggctatgccatctgggccatgtgacctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aacaagccaagtggctctactctatcttgcggctatgccatctgggccatgtgacctctg 347
Query: 361 tgggagaagagatgaaggcataggagatttttgtgagccaggcctggaagcaacgcatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tgggagaagagatgaaggcataggagatttttgtgagccaggcctggaagcaacgcatac 287
Query: 421 acatcctagtatacacaccttctgccgc 448
||||||||||||||||||||||||||||
Sbjct: 286 acatcctagtatacacaccttctgccgc 259
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_a21.g1 MSMg01no128_a21.g1 CHROMAT_FILE:
MSMg01no128_a21.g1 PHD_FILE: MSMg01no128_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:01 2005
(292 letters)
>mm_chr16_35101281_35101973
Length = 693
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 ttttaaaagaga-aaaaactttttaaaatgaaaataattgtgtgatcaccccatgaaata 59
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 201 ttttaaaagagataaaaactttttaaaatgaaaataattgtgtgaacacctcatgaaata 260
Query: 60 gtaatttatctgtgtgggtttgtttgtaaaattcaaagctattaggaattttctaatgtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaatttatctgtgtgggtttgtttgtaaaattcaaagctattaggaattttctaatgtt 320
Query: 120 aaaattagtcaagattttattttcacagtagtttgtatgggcattttggaagtagcagaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaattagtcaagattttattttcacagtagtttgtatgggcattttggaagtagcagaa 380
Query: 180 tgtagctgtgtaatgtactgtttccttcagtctgcatgcagcttggcgtgccttagggat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtagctgtgtaatgtactgtttccttcagtctgcatgcagcttggcgtgccttagggat 440
Query: 240 ttctggatggttgctccatctccttcctttccgtccccacagggaaggaa 289
| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 tcctggatggctgctccatctccttcctctccgtccccacagggaaggaa 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
