Query= MSMg01no128_n16.b1 MSMg01no128_n16.b1 CHROMAT_FILE:
MSMg01no128_n16.b1 PHD_FILE: MSMg01no128_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:05 2005
(624 letters)
>mm_chr16_74978456_74979476
Length = 1021
Score = 1073 bits (555), Expect = 0.0
Identities = 604/621 (97%), Gaps = 3/621 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttttatttgcctgatgatattcctatagatttggaaatctgagggaatacaga 63
|||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ggaattcttttatttgtttgacgatattcctatagatttggaaatctgagggaatacaga 762
Query: 64 atgaaggtacaaatgggtgaaagagaaaatttccagaagagttcataaacactaataaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 atgaaggtacaaatgggtgaaagagaaaatttccagaagagttcataaacactaataaag 702
Query: 124 aaataaaaatcagatcaaagaaacagtaatatgttttagagattttcagaacagcatggt 183
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 701 aaataaaaatcagatcaaagaaacagtaatatgttttagagagattcggaacagcatggt 642
Query: 184 tgggagcagaaatagatcataactctcagtaaaaaaaagagacccaatggaaagcatgtt 243
|||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 641 tgggcgca-aaatagatcataactctcagt--aaaaaagagacccagtggaaagcatgtt 585
Query: 244 tggcaaagggttaattttgttgtctattttccttttattctttaagattgaaattatcat 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 584 tggcaaagggttaattttgttgtctattttccttttattctttgagattgaaattatcat 525
Query: 304 gaaatgataattattattatataaaacggggttatgttaatgaaaagaaaaagaaaccat 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaaatgataattattattatatagaacggggttatgttaatgaaaagaaaaagaaaccat 465
Query: 364 ggagtataagaacagatgagcaaaaattaggaaaaattaaagaaaatgtgaatgtggtca 423
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ggaatataagaacagatgagcaaaaattaggaaaaattaaagaaaatgtgaatgtggtca 405
Query: 424 tcttcagggaccaggtaggaagaaatatccctgagattttgatgaatcggaggtggatgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tcttcagggaccaggtaggaagaaatatccctgagattttgatgaatcggaggtggatgc 345
Query: 484 atagttactgatgtgtgggacgaataggaaggttagtgtgaatgtgagaaacagaagctt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atagttactgatgtgtgggacgaataggaaggttagtgtgaatgtgagaaacagaagctt 285
Query: 544 ggtgagaggtagaggaagggttatactttatcagagggttaaacaaggagaacttagctg 603
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 284 ggtgagaggtagaggaagggttatactttatcaaagggctaaacaaggagaacttagctg 225
Query: 604 cttatttaacagcactcacta 624
||||||||||| |||||||||
Sbjct: 224 cttatttaacaacactcacta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1021
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1011
Effective search space: 620754
Effective search space used: 620754
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_n16.g1 MSMg01no128_n16.g1 CHROMAT_FILE:
MSMg01no128_n16.g1 PHD_FILE: MSMg01no128_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:05 2005
(454 letters)
>mm_chr16_74854275_74855128
Length = 854
Score = 810 bits (419), Expect = 0.0
Identities = 446/455 (98%), Gaps = 2/455 (0%)
Strand = Plus / Plus
Query: 1 aggaattgaatgcagaaaccatagagaagtgatccttgatggatcactgtgcttcatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaattgaatgcagaaaccatagagaagtgatccttgatggatcactgtgcttcatgct 260
Query: 61 tcttgtgtaaccttcagatactccccaagacaacctaaaataagagcactcagaaggtga 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tcttgtgtaaccttcagaaactccccaagacaacctaaaataagagcactcagtaggtga 320
Query: 121 cacataccc-tccactggtggctgatatgcagagttgtagggccatgcaagatataaaag 179
||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 cacatacccctc-actggtggctgatatacagagttgtagggccatgcaagatataaaag 379
Query: 180 gattatactttttactctctgtggatatgtaggacaaaggtcatggagatataaagtatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gattatactttttactctctgtggatatgtaggacaaaggtcatggagatataaagtatg 439
Query: 240 gatgaaagtggtgagtttaatacattttaaggagatagaacgtatttgatattaatatgt 299
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 440 gatgaaagtggtgagtttaataccttttaaggagatagaatgtatttgatattaatatgt 499
Query: 300 aatgtttggggggattatgcattaatctgtgattcatcccaaatcttaagtatatgaaat 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 aatgtttggggggattatgcattaatctgtgattcatcctaaatcttaagtatatgaaat 559
Query: 360 ctgctgtactttaaatattttcccttttaccacccaggttgaaatttaattttgactgtg 419
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgccgtactttaaatattttcccttttaccacccaggttgaaatttaattttgactgtg 619
Query: 420 caatactaagagataggatggattcagacctttag 454
|||||||||||||||||||||||||||||||||||
Sbjct: 620 caatactaagagataggatggattcagacctttag 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
