Query= MSMg01no129_d11.b1 MSMg01no129_d11.b1 CHROMAT_FILE:
MSMg01no129_d11.b1 PHD_FILE: MSMg01no129_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:33 2005
(230 letters)
>mm_chr16_19629672_19630301
Length = 630
Score = 429 bits (222), Expect = e-125
Identities = 228/230 (99%)
Strand = Plus / Minus
Query: 1 ctcaaaacccacttctgcatgccttgctgattctcaggggatcaaattccctatgctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctcaaaacccacttctgcatgccttgctgattctcaggggatcaaattccctatgctttc 371
Query: 61 ctgttataagaagggtgatttctctcccagaaaccacacaccaagaacttcaagcctaga 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 370 ctgttataagaagggtgatttctctcctagaaaccacacaccaagaacttcaagcctaga 311
Query: 121 tgtcttccatgttttccatgttacatcctaatgatgccttgcccagtttgagctgatcta 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 310 tgtcttccatgttttccatgttacatcctaatgatgcattgcccagtttgagctgatcta 251
Query: 181 aagtggatgctcgatgccttccatcatatctatattattaatagcataag 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aagtggatgctcgatgccttccatcatatctatattattaatagcataag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no129_d11.g1 MSMg01no129_d11.g1 CHROMAT_FILE:
MSMg01no129_d11.g1 PHD_FILE: MSMg01no129_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:33 2005
(289 letters)
>mm_chr16_19411252_19411941
Length = 690
Score = 495 bits (256), Expect = e-144
Identities = 282/292 (96%), Gaps = 5/292 (1%)
Strand = Plus / Plus
Query: 1 ttccaggacaaaaaacaaaccagatattagaagaacccccttttgaactccctaagagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ttccaggacaaaaaacaaaccagatattagaagaacccccttttgaactggctaagagtg 260
Query: 61 atcccacagcagagaacccctgtaagtcatctctctggggggccaatccaagaagaccac 120
|||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 261 atcccatagcagagaacccctgtaagtcatctttctggagggccaatccaagaagaccac 320
Query: 121 taaatcagtgtcatggcagtacagta--agggagcaagccttgtatgaccacctgtctgg 178
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 321 taaatcagtgtcatggcagtaca--accagggagcaagccttgtatgaccacctgtctgg 378
Query: 179 cacccctgcccagaaaaaa-ttgcctgagccaggaatagcactcctaaggccattcctga 237
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cacccctgcccagaaaaaaattgcctgagccaggaatagcactcctaaggccattcctga 438
Query: 238 tactcagagaacctgggcatcactagaagaacaagtaagtggtggagacata 289
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tactcagagaacctgggcatcactagaagaacaagtaagtggtggagacata 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
