Query= MSMg01no130_a08.b1 MSMg01no130_a08.b1 CHROMAT_FILE:
MSMg01no130_a08.b1 PHD_FILE: MSMg01no130_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:38 2005
(194 letters)
>mm_chr16_73001574_73002167
Length = 594
Score = 331 bits (171), Expect = 2e-95
Identities = 191/203 (94%), Gaps = 9/203 (4%)
Strand = Plus / Minus
Query: 1 tggacagatccattgatctgtagagctgtgtttcagagttcaaatctttactggctgcac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 463 tggacagatccattgatctgtagagctgtgtttcagagttcaaatctttactggctgcgc 404
Query: 61 ---------tttttttttgccatggtgtttagaaaacaaacacagagtctgaaatattca 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttttttttttttttttttgccatggtgtttagaaaacaaacacagagtctgaaatattca 344
Query: 112 gtgtcattttgaatcttgtaaggtaggactacctgactgacttcatttttgatccactaa 171
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 343 gcgtcattttgaatcttgtaaggtaggactacctgcctgacttcatttttgatccactaa 284
Query: 172 aattgcttcattataaaacagaa 194
|||||||||||||||||||||||
Sbjct: 283 aattgcttcattataaaacagaa 261
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no130_a08.g1 MSMg01no130_a08.g1 CHROMAT_FILE:
MSMg01no130_a08.g1 PHD_FILE: MSMg01no130_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:38 2005
(402 letters)
>mm_chr16_72836773_72837574
Length = 802
Score = 731 bits (378), Expect = 0.0
Identities = 396/402 (98%)
Strand = Plus / Plus
Query: 1 taatagttaaattcctcttaaatatacatgatatattctgaagctaaaagtaatatgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatagttaaattcctcttaaatatacatgatatattctgaagctaaaagtaatatgcac 260
Query: 61 tcaaccagtttttaaaatctatttggaacattaaacatgatagaagtagaaaaagtgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaccagtttttaaaatctatttggaacattaaacatgatagaagtagaaaaagtgctc 320
Query: 121 ttataaagtcctctatgaagggaaattgtgtcaagttcctgattagacagacaccattcc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ttataaagtcctctatgaagggaaattgtgtcaacttcctgattagacagacaccattcc 380
Query: 181 atctccaagggagaatactcagtgtaactgtggcttcatagggatctggggtttttctgt 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctccaagggagaatgttcagtgtaactgtggcttcatagggatctggggtttttctgt 440
Query: 241 gattatttttatagtttctattatttattagttcttagtttttattcttatttacataaa 300
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 ggttatttttatagtttctattatttattcgttcttagtttttattcttatttacataaa 500
Query: 301 ttaaacttttaaaaatctcaattaacttttaaaatctcaaactttaaaaaatctcaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaacttttaaaaatctcaattaacttttaaaatctcaaactttaaaaaatctcaatga 560
Query: 361 aacctaagatgttaaatatatttgctatattatgattacaat 402
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 aacctaagatgttaaatatatttgctacattatgattacaat 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
