Query= MSMg01no130_f14.b1 MSMg01no130_f14.b1 CHROMAT_FILE:
MSMg01no130_f14.b1 PHD_FILE: MSMg01no130_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:06 2005
(411 letters)
>mm_chr16_47880011_47880817
Length = 807
Score = 729 bits (377), Expect = 0.0
Identities = 401/411 (97%), Gaps = 4/411 (0%)
Strand = Plus / Minus
Query: 1 gtgaaaggaagaccagttgtcttcaaggtggagggacagcatgaagccgataaataggac 60
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 607 gtgaaaggaagaccagttgtcttgaaggtggagggacagcatgaagccaataaataggac 548
Query: 61 cttccaggtcctttactctctgtgagaatgagctcaggtctctcatttccactttaaagc 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 547 cttccaggtcctttactctctgtgagaatgacctcaggtctctcatttccactttaaagc 488
Query: 121 aatcttctctgttatgtggtgatggaagatttcaataataattgtagagttcaaagcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aatcttctctgttatgtggtgatggaagatttcaataataattgtagagttcaaagcctt 428
Query: 181 taaggaggtgtaatatagtggaaagaggtataagtatcatgtaatggcattgttcataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 taaggaggtgtaatatagtggaaagaggtataagtatcatgtaatggcattgttcataag 368
Query: 241 ttcacatggttacttcctaatcacttacctttcaagcattgtgctttttatgataagaca 300
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 ttcacatggttaattcctaatcac----ctttcaagcattgtgctttttatgataagaca 312
Query: 301 tgcttttaaagaaatgaattacagctgagtcgctcagtgtcacattctctgtgtctttat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 311 tgcttttaaagaaatgaattacagctgagtcgctcagtgtcacattctctgtgtctttct 252
Query: 361 gtgtgtctagggatcagtaagtcatttgtgaaacacatattgaattctgag 411
||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 251 gtgtgtctagggatcagtaagtcatttgtgaaacaaatattgaattctgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 807
Length adjustment: 9
Effective length of query: 402
Effective length of database: 798
Effective search space: 320796
Effective search space used: 320796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_f14.g1 MSMg01no130_f14.g1 CHROMAT_FILE:
MSMg01no130_f14.g1 PHD_FILE: MSMg01no130_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:06 2005
(353 letters)
>mm_chr16_47792375_47793127
Length = 753
Score = 636 bits (329), Expect = 0.0
Identities = 347/353 (98%)
Strand = Plus / Plus
Query: 1 gagagagcacatttaacattttaaaattggtagcattacaatttgtaattatactacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagagagcacatttaacattttaaaattggtagcattacaatttgtaattatactacctt 260
Query: 61 aaatactattcaaaatctttgatcctaggccactttgcttctacaggctgaggcagcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatactattcaaaatctttgatcctaggccactttgcttctacaggctgaggcagcaag 320
Query: 121 ggggcagataaacagaattattttaagtctgagaaataaatttctaccttaattaaagtt 180
|||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 321 ggggcaaataaacagaattattttaagtatgagaaataaatttctacattaattaaagtt 380
Query: 181 tattaattatgagtttcatttgtacatagctagaagtagactgattctatacttctggaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 tattaattatgagtttcatttgtacatagctagaagtagactgattctatacctctggaa 440
Query: 241 gttatgttaggatcagctcagaagatttcaaaagcaaccaatgcctgggccttctctggg 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttatgttaggatcagctcaaaagatttcaaaagcaaccaatgcctgggccttctctggg 500
Query: 301 tccactgctgtatttcaccttgttagaaccaagcacagccatttagaagcttg 353
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tccactgctgtatttcaccttgttagaaccaagcacaaccatttagaagcttg 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
