Query= MSMg01no132_e03.b1 MSMg01no132_e03.b1 CHROMAT_FILE:
MSMg01no132_e03.b1 PHD_FILE: MSMg01no132_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:43 2005
(651 letters)
>mm_chr16_40213725_40214776
Length = 1052
Score = 1236 bits (639), Expect = 0.0
Identities = 645/647 (99%), Gaps = 1/647 (0%)
Strand = Plus / Minus
Query: 6 gaattcacaagtgtgtctat-aaattcataaggcaacaagcactttaaaaacacacttgg 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 852 gaattcacaagtgtgtctataaaattcataaggcaacaagcactttaaaaacacacttgg 793
Query: 65 caccaataaaacactaatttcctttactataaaattacaggggaaggaaatagtaagaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 caccaataaaacactaatttcctttactataaaattacaggggaaggaaatagtaagaac 733
Query: 125 agctcagaaaatgtgatctaggatattgtaaaactcaatatatgttaccaagtatgagct 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 agctcagaacatgtgatctaggatattgtaaaactcaatatatgttaccaagtatgagct 673
Query: 185 catgtggcacaattataagtgctatctttgagatcatacaagagggttgtgatattttgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 catgtggcacaattataagtgctatctttgagatcatacaagagggttgtgatattttgc 613
Query: 245 ttgatgcccaaaagtgatatggtgaatcactacttccaggcaatggacaagatgagaagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ttgatgcccaaaagtgatatggtgaatcactacttccaggcaatggacaagatgagaagc 553
Query: 305 tgtttaatatgagtctcagatcagaacctgaaaataaaaattagctgttgtatgtggttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgtttaatatgagtctcagatcagaacctgaaaataaaaattagctgttgtatgtggttt 493
Query: 365 gtatggccagcatcatgctcctttgtttcaaattgcttatgcaatttgaagacttttagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtatggccagcatcatgctcctttgtttcaaattgcttatgcaatttgaagacttttagg 433
Query: 425 cagaatagataaactatacttagacacaatgtccattatgtctattgctctatatgaatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cagaatagataaactatacttagacacaatgtccattatgtctattgctctatatgaatg 373
Query: 485 ctgcttcactcttgtcttcttttcttagaaagctgtcatggatgcatgtaatatggattt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctgcttcactcttgtcttcttttcttagaaagctgtcatggatgcatgtaatatggattt 313
Query: 545 caacacaggatactgagctctgtgcaaggatctgaatagggagggtttcttccttgaatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caacacaggatactgagctctgtgcaaggatctgaatagggagggtttcttccttgaatc 253
Query: 605 agaggactttagagttctaataaattcacttttcatatctaaagaag 651
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agaggactttagagttctaataaattcacttttcatatctaaagaag 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_e03.g1 MSMg01no132_e03.g1 CHROMAT_FILE:
MSMg01no132_e03.g1 PHD_FILE: MSMg01no132_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:43 2005
(625 letters)
>mm_chr16_40073761_40074785
Length = 1025
Score = 1100 bits (569), Expect = 0.0
Identities = 600/613 (97%), Gaps = 5/613 (0%)
Strand = Plus / Plus
Query: 1 tctttggacttatactggtgaatttttttctctcatagaatagtcagggtggatgggatg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tctttggacttatactggtgaatttttttccctcatagaatagtcagggtggatgggatg 260
Query: 61 agaccagggagtttcatagacattttaaagcacggcaaagaagataaatgtcaatacgat 120
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 agaccagagagtttcatagacattttcaagcacggcaaagaagataaatgtcaatacgat 320
Query: 121 tacagagtggcactttctccattcattctccctgcaagaatttcaacttaaaaatctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacagagtggcactttctccattcattctccctgcaagaatttcaacttaaaaatctcca 380
Query: 181 ctataaaaatacataaggcatgactggtactgtcacagactagatgggagtgaattggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctataaaaatacataaggcatgactggtactgtcacagactagatgggagtgaattggaa 440
Query: 241 atataataataataataaaaaacaaaactgagggagtctttatagatcatttgatgacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atataataataataataaaaaacaaaactgagggagtctttatagatcatttgatgacaa 500
Query: 301 atgtttcaaatctttagtttgtaatattaagaaactcttttagcaaaacatgtgttgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtttcaaatctttagtttgtaatattaagaaactcttttagcaaaacatgtgttgaat 560
Query: 361 gcataattctccaaagaatttgtgtgctcacatggacatgagaacatagtagaaccaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcataattctccaaagaatttgtgtgctcacatggacatgagaacatagtagaaccaaaa 620
Query: 421 gattttaatcaaaactttaaaaaatgaaacatacatggatcaagttaaaaaatacacagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gattttaatcaaaactttaaaaaatgaaacatacatggatcaagttaaaaaatacacagg 680
Query: 481 caaaacatacatccaaaatacagaaaaccaagtagacaagtaagtgttcaaaatacacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaaacatacatccaaaatacagaaaaccaagtagacaagtaagtgttcaaaatacacac 740
Query: 541 cacacacacacacacacacacacacacacacacacacacacacacacacacacac----- 595
|||||||||||||||||||||||||||||||||||| | |||||||| | ||| |
Sbjct: 741 cacacacacacacacacacacacacacacacacacagatacacacacgcccacccccccc 800
Query: 596 acacacacacaga 608
|||||||||||||
Sbjct: 801 acacacacacaga 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
