Query= MSMg01no133_g03.b1 MSMg01no133_g03.b1 CHROMAT_FILE:
MSMg01no133_g03.b1 PHD_FILE: MSMg01no133_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:11 2005
(593 letters)
>mm_chr16_47978191_47979180
Length = 990
Score = 1048 bits (542), Expect = 0.0
Identities = 578/592 (97%), Gaps = 6/592 (1%)
Strand = Plus / Minus
Query: 5 gaattctacatcttgaccctctttcttctgcactaggtggagcttgatcactagcccccc 64
|||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 891 gaattctacatcttgatcctctttcatctgcactaggtggagcttgatcactagtccccc 832
Query: 65 gctcaaacctgcctacactgtgacatacttcctccaacacctcttccaataaggtcatgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gctcaaacctgcctacactgtgacatacttcctccaacacctcttccaataaggtcatgc 772
Query: 125 ctcctaatagagccacttcccatgtgccaagca-ttttaaatcaccataaactgtgtttc 183
||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||
Sbjct: 771 ctcctaatagagccacttcccatgtgccaagcatttttaaaccgccataaactgtgtttc 712
Query: 184 gtaatttagttctctgaacatctacatagaacttgaagtcccccttttccctcatagaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 711 gtaatttagttctctgaacatctacatagaacttgaagtcccccttttccctcat---ag 655
Query: 244 aaacaatattgtaagtgctgattacagttctcaatacaaatcataacaacttatttaatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aaacaatattgtaagtgctgattacagttctcaatacaaatcataacaacttatttaatc 595
Query: 304 cacagtaaagctagatcagtatttttaagacaatgtgaagcatgaagacaatgaaacctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cacagtaaagctagatcagtatttttaagacaatgtgaagcatgaagacaatgaaacctt 535
Query: 364 tggagtcagaatgtgtttaaatcattagtttcagaaagaagaggccagttggagggggag 423
|||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 534 tggagtcagaatctgtttgaatcattagtttcagaaaaaagaggccagttggagggggag 475
Query: 424 gggagataaaaatttaatataagtcacattcagagagatatgtatatgaaaatgtcataa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gggagataaaaatttaatataagtcacattcagagagatatgtatatgaaaatgtcataa 415
Query: 484 ggaatcctaacaaatgtccactaatatacttttga--tttttttactgggattaaataat 541
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 414 ggaatcctaacaaatgtccactaatatacttttgatttttttttactgggattaaataat 355
Query: 542 ttaataactttataatataatctcattaggagtaaggcatactttttttcta 593
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttaataactttataatataatctcattaggagtaaggcatactttttttcta 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 990
Length adjustment: 10
Effective length of query: 583
Effective length of database: 980
Effective search space: 571340
Effective search space used: 571340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_g03.g1 MSMg01no133_g03.g1 CHROMAT_FILE:
MSMg01no133_g03.g1 PHD_FILE: MSMg01no133_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:11 2005
(570 letters)
>mm_chr16_47792073_47793042
Length = 970
Score = 1060 bits (548), Expect = 0.0
Identities = 566/572 (98%), Gaps = 2/572 (0%)
Strand = Plus / Plus
Query: 1 catcctacccac-caaaaataaaaacaaaaacataataaattgtttcaccttgtattcat 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 catcctacccacgcaaaaataaaaacaaaaacataataaattgtttcaccttgtattcat 258
Query: 60 gacagctattttcaaaattgtagtaaaatattcatagtacaatatttagaatttaattat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gacagctattttcaaaattgtagtaaaatattcatagtacaatatttagaatttaattat 318
Query: 120 cattgagtgtacatttcatttgcatgaagtaagtttgcactgtag-tcagtcatcagtct 178
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 319 cattgagtgtacatttcatttgcatgaagtaagtttgcactgtaggtcagtcatcagtct 378
Query: 179 gatgcattttcttagcttttatcaacctacaaaagtgaatctctgtactcactagacact 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gatgcattttcttagcttttatcaacctacaaaagtgaatctctgtactcactagacact 438
Query: 239 aattccccaaaccccttctcctaactctgaaaacccattctgctttctgactttatggtt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aattccccaaaccccttctcctaactctgaaaacccattctgctttctgactttatggtt 498
Query: 299 atctgagagagcacatttaacattttaaaattggtagcattacaatttgtaattatacta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atctgagagagcacatttaacattttaaaattggtagcattacaatttgtaattatacta 558
Query: 359 ccttaaatactattcaaaatctttgatcctaggccactttgcttctacaggctgaggcag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ccttaaatactattcaaaatctttgatcctaggccactttgcttctacaggctgaggcag 618
Query: 419 caagggggcagataaacagaattattttaagtctgagaaataaatttctaccttaattaa 478
|||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 619 caagggggcaaataaacagaattattttaagtatgagaaataaatttctacattaattaa 678
Query: 479 agtttattaattatgagtttcatttgtacatagctagaagtagactgattctatacttct 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 679 agtttattaattatgagtttcatttgtacatagctagaagtagactgattctatacctct 738
Query: 539 ggaagttatgttaggatcagctcaaaagattt 570
||||||||||||||||||||||||||||||||
Sbjct: 739 ggaagttatgttaggatcagctcaaaagattt 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
