Query= MSMg01no133_m21.b1 MSMg01no133_m21.b1 CHROMAT_FILE:
MSMg01no133_m21.b1 PHD_FILE: MSMg01no133_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:42 2005
(600 letters)
>mm_chr16_42445639_42446638
Length = 1000
Score = 1087 bits (562), Expect = 0.0
Identities = 591/601 (98%), Gaps = 2/601 (0%)
Strand = Plus / Minus
Query: 1 aagggaggaggaagcgacatctttcccactgcaaggggaaaattcacatctctatcaata 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 800 aagggaggaggaagcgacatctttcccactgcaaggggaaaactcacatctctatcaata 741
Query: 61 gagaaaaacaaaacaattttatctaactaaagttacacaacatactaggaacttcagaag 120
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 740 gagaaaagcaaaacaattttatctaactaaagttgcacaacatactaggaacttcagaag 681
Query: 121 agaagacacaaagttccagaacaaactgtttcagtggacccagaaatatgactgaagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agaagacacaaagttccagaacaaactgtttcagtggacccagaaatatgactgaagagc 621
Query: 181 aaaggccatgcaagacctactgacagtaaactggggaagccagcagaggtctgtttgtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaaggccatgcaagacctactgacagtaaactggggaagccagcagaggtctgtttgtag 561
Query: 241 tcttctactgaaccttcaggtcgatgacagaactcactctggaaaagggctttgagacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcttctactgaaccttcaggtcgatgacagaactcactctggaaaagggctttgagacct 501
Query: 301 ccggaagaggcagaccatgacaggatcatgcttcaggacagatgggtttgagtaagaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 ccggaagaggcagaccatgacaggatcatgcttcaggacagatgggtttgagtaagagcg 441
Query: 361 tcaaggtgccattctggacttagagagccagatatgaatgaaggtgtctatcaatcagga 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaaggtgccgttctggacttagagagccagatatgaatgaaggtgtctatcaatcagga 381
Query: 421 gaaggggtaacagagtcctggaggtacaaggagttttctccatgccttcaggtcaggtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaaggggtaacagagtcctggaggtacaaggagttttctccatgccttcaggtcaggtgg 321
Query: 481 gggtggggggctatgcactaaattctcatgtacagctctatctgtggcatggggt-agtg 539
||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | ||
Sbjct: 320 gggtggggggctatgcactaaattctcatgtacagctctgtctgcggcatggggtga-tg 262
Query: 540 cagagtgtacatganaagaaaatggagtagccggtagcaaagacttcgttctcttgttcg 599
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagtgtacatgaaaagaaaatggagtagccggtagcaaagacttcgttctcttgttcg 202
Query: 600 t 600
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_m21.g1 MSMg01no133_m21.g1 CHROMAT_FILE:
MSMg01no133_m21.g1 PHD_FILE: MSMg01no133_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:42 2005
(621 letters)
>mm_chr16_42386864_42387884
Length = 1021
Score = 1154 bits (597), Expect = 0.0
Identities = 615/621 (99%), Gaps = 1/621 (0%)
Strand = Plus / Plus
Query: 1 cagtgactctggatctcactcacctggacctaaattcttccagctagacattgttttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgactctggatctcactcacctggacctaaattcttccagctagacattgttttttg 260
Query: 61 tggtttataaatctttttttatttcattgtatttatttgtcacaaatcaatttttataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtttataaatctttttttatttcattgtatttatttgtcacaaatcaatttttataca 320
Query: 121 atgctttacttaaatattaccatctccctgggagatactattttccattttatagattag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctttacttaaatattaccatctccctgggagatactattttccattttatagattag 380
Query: 181 gtaaaaaatagctctaggagcttaaacaccctgtattacacaggattaatgacatatctg 240
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 gtaaaaaatagctcaaggagcttaaacaccctgtattgcacaggattaatgacatatctg 440
Query: 241 gaatggtctcagttaggttcctatttctgtaatgaaacaccatgactaaaagcaagtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatggtctcagttaggttcctatttctgtaatgaaacaccatgactaaaagcaagtttg 500
Query: 301 ggaagaaagagtttattttacttatatttcgacattatagttcatcatcaaaggcaatca 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 ggaagaaagagtttattttacttatatttcgacattatagttcatcattaaaggcaatca 560
Query: 361 gggcaggagttaaaacagggcaaaaacctggaggcacgagctgatacagaagccatggtg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 gggcaggagttaaaacagggcaaaaacctggaggcacgagctgatacagaagccatgggg 620
Query: 421 gagtgctgttctggcttgcttctcactgactttctggaaaacctgctttcttatagaacc 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagtgctgctctggcttgcttctcactgactttctggaaaacctgctttcttatagaacc 680
Query: 481 caagaccaccatcccaggggggggtagtaccacccatagtgagctgggttctcccacttc 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagaccaccatcccaggggggg-tagtaccacccatagtgagctgggttctcccacttc 739
Query: 541 aatcaccaatggagaaaatgccccgaaaggcttgtccacaggtgaaaatattttctcagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aatcaccaatggagaaaatgccccgaaaggcttgtccacaggtgaaaatattttctcagt 799
Query: 601 ttcagctgaagttacctcttc 621
|||||||||||||||||||||
Sbjct: 800 ttcagctgaagttacctcttc 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
