Query= MSMg01no134_b08.b1 MSMg01no134_b08.b1 CHROMAT_FILE:
MSMg01no134_b08.b1 PHD_FILE: MSMg01no134_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:08 2005
(366 letters)
>mm_chr16_30992892_30993657
Length = 766
Score = 333 bits (172), Expect = 1e-95
Identities = 181/186 (97%), Gaps = 4/186 (2%)
Strand = Plus / Plus
Query: 147 ggcccattgtgggtggtgccatccctgggctggtagtcctgggttctataagagagcagg 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggcccattgtgggtggtgccatccctgggctggtagtcctgggttctataagagagcagg 640
Query: 207 ctgagcaagccaggggaagcaagccagtaa----catccctccatggcctctgcatcagc 262
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 641 ctgagcaagccaggggaagcaagccagtaaagaacatccctccatggcctctgcatcagc 700
Query: 263 ttctgcttcctgacctgcttgagttccagtcctgacttcctttggtgatgaacagcaatg 322
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tcctgcttcctgacctgcttgagttccagtcctgacttcctttggtgatgaacagcaatg 760
Query: 323 tgggaa 328
||||||
Sbjct: 761 tgggaa 766
Score = 246 bits (127), Expect = 2e-69
Identities = 145/151 (96%)
Strand = Plus / Plus
Query: 1 catgtcttaagtggcagcacctagtgaactctaaaacacatctacaccatgaagatcagt 60
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 201 catgtcttaagtggcagcacctagtgggctctaaaacacatctataccatgaagatcagt 260
Query: 61 tgttccacctctagcattttaagcatttcatgtttaagcaactctgcagcagacagttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 tgttccacctctagcattttaagcatttcatgtttaagcaactctgcagcagacagtaat 320
Query: 121 cacaggtaaatgtctaccattttaaaggccc 151
||||||||||||||||| ||||||||||||
Sbjct: 321 cacaggtaaatgtctactgttttaaaggccc 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_b08.g1 MSMg01no134_b08.g1 CHROMAT_FILE:
MSMg01no134_b08.g1 PHD_FILE: MSMg01no134_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:08 2005
(736 letters)
>mm_chr16_31037589_31038724
Length = 1136
Score = 1361 bits (704), Expect = 0.0
Identities = 728/736 (98%), Gaps = 1/736 (0%)
Strand = Plus / Minus
Query: 1 acttttgaaacctcaaagcccacacctagtgacacacttccaacaaggccacacctccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 acttttgaaacctcaaagcccacacctagtgacacacttccaacaaggccacacctccta 758
Query: 61 atcctttcaaatagtgccactctctaagcattcaagaatatgaacctatcggggccatta 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 757 atcctttcaaatagtgccactctctaagcattcaagaatatgaacctattggggccatta 698
Query: 121 tccaaaccaccacactccctaaactaacacagaagtttaataaccaaagttttatgccag 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tccaaaccaccacacttcctaaactaacacagaagtttaataaccaaagttttatgccag 638
Query: 181 tgatattaaaagggcagaaactcagtctagctatagtgtttagaggtgtggggtatttag 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 637 tgatattaaaagggcagaaactcagtctagctgtagtgtttagaggtgtggggtatttag 578
Query: 241 aagtgatcaaacttggtcattgtggtggagcttccttgacggaatactcgtgactttaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aagtgatcaaacttggtcattgtggtggagcttccttgacggaatactcgtgactttaaa 518
Query: 301 agggagagggagagagactacagactgagattccatacacatacctgctatgatatgagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 agggagagggagagagactacagactgagattccatacacatacctgctatgatatgagg 458
Query: 361 taactgggtggagagggaaagagggcaagtgtagtaaaaagtgttaaaaatcccatcccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 457 taactgggtggagagggaaagagggcaagtgtagtaaaaagtgttaaaaatcccagccca 398
Query: 421 gggcttctttacagcctttatttttgaacagccttaggcagcaccatagctggatagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gggcttctttacagcctttatttttgaacagccttaggcagcaccatagctggatagctg 338
Query: 481 cctatcaataacccacttctatttactgtgttccatctggactgcttttaacccaattgg 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 337 cctatcaataacccacttctatttactgtgctccatctggactgcttttaacccaattgg 278
Query: 541 ccacgttctcttggatcttagccatggcttctctccttttccctcttgcatgttcttctt 600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ccacattctcttggatcttagccatggcttctctccttttccctcttgcatgttcttctt 218
Query: 601 ctttcaagatggcttcttctccctcctccctcctcacacgtgatctctcttctgcaagcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ctttcaagatggcttcttctccctcctccctcctcacacgtgatctctcttctgcaagcc 158
Query: 661 agggaaacctcaaccccacctatgtctcttctgactagctattagcatctttattcacca 720
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 agggaaacctcaa-cccacctatgtctcttctgactagctattagcatctttattcacca 99
Query: 721 atcagaattaacttgg 736
||||||||||||||||
Sbjct: 98 atcagaattaacttgg 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 736
Length of database: 1136
Length adjustment: 10
Effective length of query: 726
Effective length of database: 1126
Effective search space: 817476
Effective search space used: 817476
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
