Query= MSMg01no134_n13.b1 MSMg01no134_n13.b1 CHROMAT_FILE:
MSMg01no134_n13.b1 PHD_FILE: MSMg01no134_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:40 2005
(375 letters)
>mm_chr16_90362523_90363297
Length = 775
Score = 596 bits (308), Expect = e-174
Identities = 364/390 (93%), Gaps = 16/390 (4%)
Strand = Plus / Plus
Query: 1 aaaggcataattcataa-tatcatataatctg------------aaacca-cttgatgac 46
|||||||||||||| || |||||||||||||| |||||| || ||||||
Sbjct: 187 aaaggcataattcacaactatcatataatctgttctctcctcagaaaccagct-gatgac 245
Query: 47 ccc-atgtccaccatgctgcttctgtgactctactctgcgttcatcgactctggaactca 105
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ccccatgtccaccatgctgcttctgtgactctactctgcgttcatcgactctggaactca 305
Query: 106 gtctcgggcatctgcagctgtcagcagggggtggggaggaggccttggtgaacctcacat 165
||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 306 gtcaggggcgtctgcagctgtcagcagggggtggggaggaagccgtggtgaacctcacat 365
Query: 166 tgactcttacaacttctgcctagaagttacatgggaccctgcataagaaagtggctttcc 225
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgactcttacagcttctgcctagaagttacatgggaccctgcataagaaagtggctttcc 425
Query: 226 cgatgccactggcacacggacacagaatcttcccgtagggaacagcagcaaatatttggg 285
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 426 cgatgccactggcacacagacacagaatcttcccgtagggaacagcagcaagtatttggg 485
Query: 286 aacgataacgtaaagaccaaagcacttagtaaatatttgttgattgaatgttcctatgca 345
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 486 aacgataacgtaaagaccaaagcacttagtaaatatttgctgattgaatgttcctatgca 545
Query: 346 gtaagtaatcacatcccaatgtgttatctg 375
||||||||||||||||||||||||||||||
Sbjct: 546 gtaagtaatcacatcccaatgtgttatctg 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_n13.g1 MSMg01no134_n13.g1 CHROMAT_FILE:
MSMg01no134_n13.g1 PHD_FILE: MSMg01no134_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:40 2005
(528 letters)
>mm_chr16_90437858_90438785
Length = 928
Score = 982 bits (508), Expect = 0.0
Identities = 523/528 (99%)
Strand = Plus / Minus
Query: 1 cattttccttcccagacccctggaacaacatcccttatcttagagctcaggtccgatagt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 728 cattttccttcccagacccctggaacaacatccgttatcttagagctcaggtctgatagt 669
Query: 61 ctggacagaagacggagaccaggcagaaagtactcagaaccgtgagtgtaggaagcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ctggacagaagacggagaccaggcagaaagtactcagaaccgtgagtgtaggaagcagac 609
Query: 121 agttgctttgcgtgtacagaaccacggtgcctgacctgaagggttaacttgaattgggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 agttgctttgcgtgtacagaaccacggtgcctgacctgaagggttaacttgaattgggaa 549
Query: 181 cagagaaagatggtgagggcagcaaccagctaaggacagtggtgaccatgagcaaccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cagagaaagatggtgagggcagcaaccagctaaggacagtggtgaccatgagcaaccaga 489
Query: 241 gctcatcacagagtaggactaacactccctacaaactcagccctattgaggtcaactgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gctcatcacagagtaggactaacactccctacaaactcagccctattgaggtcaactgac 429
Query: 301 cggatcccacacaagtgatctattatctttatagagcagactggcaaagaagcaggaagt 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 428 cggatcccacacaagtgatctaatatctttatagagcagactggcaaagaagcaggaagt 369
Query: 361 ctgagccctcgcccattgtaggttctaagcaatggagacagtatagagagtggtggtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctgagccctcgcccattgtaggttctaagcaatggagacagtatagagagtggtggtttg 309
Query: 421 aagaatctgagtccaggctgctgagcgtacgtgtcaattcacagagggcatagacttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 308 gagaatctgagtccaggctgctgagcgtacgtgtcaattcacagagggcatatacttcca 249
Query: 481 gttttggcaagatggaccatttgcgactctgtttttcaaatccagcat 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gttttggcaagatggaccatttgcgactctgtttttcaaatccagcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
