TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTCCTATGTATCCAATCTTAAATCCGAATGAAAAAGTGGTTGATTA
CCTCCATAACTGGGACACCAGCATTGAACCAGTGGAAATATCTTGCCTAT
ATGTTGCTCCCTATAAACATGCTTAGCATCTTCAGGCACTATGAGGGCTA
TAGCTATCATACGAAACTTCCAGTCCCATTCTCCTCCATTTTTTATGCCT
CGTTAGCACAGAACCAATGTCTCATTATCTAGTTCTGGTGAGCTCCCGAC
GGCAGTAACAATTGCTTGTATTGTTTTGGAACCTTTAAGTGGGGCCCCCT
GGAAAAATACCATACGAGCGGGACTACTGCTGAGGCTAATATGTCCCACT
CAACAGACTGAAGCTGCCAGCAAATCTCTCTATTCCTGCCCGGAGTTTCC
ATCATCTTAAGCTTTCTCTGACCCCTTTAACTCCTATCATCCTACTCTAG
ATAGTTTCTCGATTTATAGCATTTCTCACTTCCATTAGCTCTTACTCATA
ACTGTTTCTCTTCCCATGAATGTGAAGTGCTTGTGTAGATGAGTGTGTGC
ACGTGCTTTAACCTCAGAGCTATAGCATGCGAACAATTTTGGGTCTATTT
CCTCACTGAATACAATTTTTATGACATCAGAAATATCATCCTATCTGTTT
TACTTCCACAGACACACCCTAACCCN

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAGTATACCCATCAGTCCTGAAAGGCATTTGTG
TATAAGTTGTTTTATCTCAACCCAAAACTTCAGTCAGTCCCTTTATAATA
CTTGTTTGTCATTACGATAAATGAATGACAGTTGCTCATAGTTGGCCAAA
ATATCTGTCTTGTAGAATAAAATCATCCATAAATGTTTCCTTTGCCCATT
TGACATCCCAGAAGCACAAACTAGCACAGTGATTTCCAACCTGTGGATTG
TGACCCTTTTCACAGGGGTTGTCTAAAAACATCGGATAACGTAGATATTT
ACATTACGATTCCCGTCAGTAGAAAAATTACGGCTATGAAGTAGCAATAA
AAATAATTTTATGGTTGGGGATCACCACAACATGAGGAACTTTATTAAAG
GGCCACCATGTTAGGAAGGTTGAGAACCAGTGTACCTGATACTCAGTAAG
TACCTGGGTAGCCAAAAAAGAGAATCTTTCCTGAGAATACTGATACAGAT
ACCATAATAGTTACAACACCAAATGGAAAAGGTAAGAGAAGGAAGATGGG
TATCAAGAGGGGAACTTATAGGGCCAGTGCTATGGCTCAACAGATAAAGA
TGCTTGCCACTAGGTCTGATGACCTGAGTTTGATCCCTGGGTTCCACATG
ACATCAGGAGAAAAACN

Query= MSMg01no135_d23.g1 MSMg01no135_d23.g1 CHROMAT_FILE:
MSMg01no135_d23.g1 PHD_FILE: MSMg01no135_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:20 2005
         (637 letters)



>mm_chr16_42534540_42535575
          Length = 1036

 Score =  920 bits (476), Expect = 0.0
 Identities = 500/508 (98%), Gaps = 1/508 (0%)
 Strand = Plus / Minus

                                                                        
Query: 130  aaaatatctgtcttgtagaataaaatcatccataaatgtttcctttgcccatttgacatc 189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 aaaatatctgtcttgtagaataaaatcatccataaatgtttcctttgcccatttgacatc 977

                                                                        
Query: 190  ccagaagcacaaactagcacagtgatttccaacctgtggattgtgacccttttcacaggg 249
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 976  ccagaagcacaaactagcacagtgatttccaacctgtggattgtgacccttttcgcaggg 917

                                                                        
Query: 250  gttgtctaaaaacatcggataacgtagatatttacattacgattcccgtcagtagaaaaa 309
            |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 916  gttgtctaaaaacatcagataacgtagatatttacattacgattcccatcagtagaaaaa 857

                                                                        
Query: 310  ttacggctatgaagtagcaataaaaataattttatggttggggatcaccacaacatgagg 369
            |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 856  ttacagctatgaagtagcaataaaaataattttatggttggggatcaccacaatatgagg 797

                                                                        
Query: 370  aactttattaaagggccaccatgttaggaaggttgagaaccagtgtacctgatactcagt 429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796  aactttattaaagggccaccatgttaggaaggttgagaaccagtgtacctgatactcagt 737

                                                                        
Query: 430  aagtacctgggtagccaaaaaagagaatctttcctgagaatactgatacagataccataa 489
            ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 736  aagtacctgggtagctaaaaa-gagaatctttcctgagaatactgatacagataccataa 678

                                                                        
Query: 490  tagttacaacaccaaatggaaaaggtaagagaaggaagatgggtatcaagaggggaactt 549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677  tagttacaacaccaaatggaaaaggtaagagaaggaagatgggtatcaagaggggaactt 618

                                                                        
Query: 550  atagggccagtgctatggctcaacagataaagatgcttgccactaggtctgatgacctga 609
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 617  atagggccagtgctatggctcagcagataaagatgcttgccactaggtctgatgacctga 558

                                        
Query: 610  gtttgatccctgggttccacatgacatc 637
            ||||||||||||||||||||||||||||
Sbjct: 557  gtttgatccctgggttccacatgacatc 530


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1036
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1026
Effective search space:   643302
Effective search space used:   643302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)