AATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGATCCGC
GGAATTCAGGGCTTACGATTCCATATTAGCAACTAGCTGATCCCATATTA
AACAATTTTGTCAGACACACCTGAATTACTCTAAAAATTTACTTAATCAT
GCATTGTAATTCAATGCTAAAATCTATTTGAAAATAAATCAATCAAAACT
CAGTGGCAACCTTGTAATAAGAAAATAAGTAAAGGATGCACTATTTCAGA
AGCAGCAGTGTACTAAAAATTGGTAACTTCAGACATTAACACCAGAAATA
TTACTAAAAATGGTACAGTTATTTTGTGCTTAACTCACTACTCTGAAAAA
TATTCCTTTCTGCTTACAGTTCTTTGAATAAAGTTGTTTTAGGTAACTTA
ATCTTATTAAATACACCAAGCTTTCCTGAAATTAATTTTATCAATTTAAT
ATTAATAATAAATAACCAACAGTATAAACATGTTTATTTAAATTTTTTAT
AAATTCAAATTTTGGATTTTTAAATTTTGGTGGTAAAGAAAAATTGCTTT
AGGTGACACAGGTGTAACTTAGTAGAAATGTAAACATAAATATATTTTTG
GATGACTTTCTTCAAGACTTTTAGACATTTCTGTTTTCATAAATTGTCAG
ACGTGCAGTTTGGTCTTCATATGGGTCCGGAAGGACTGGAGGATGGGCTA
TTN

GCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTACTGAAACTGTCTGGCCCTGGGA
TTCTTTTTCTTTTGGTTGGTAGAATTTAGTGCTTCTATTTCTTTAAGGGT
AATAGGACAGTTTAGGTAGTTTACCTGGTCTTTATTTGACTTTGGGAAGT
GATATCTGTCTAGAAAATTATCCATTTCATTAACATTTTTCAAATTTTGC
TGAGACCAGACATTTGAAGTAAGACCTAATGATTTTATGAATTTCTTCAG
TTTTTCTTGTTTATGTTTTGCTTTTCATTTCTGATTTTGATAATTGGGAT
AACATTTCTCTGCTTTTTAGATAGTTTGGTTAAAGGTTTATCTTTCTTGT
TGATTTTCTCACAAAACCATTATATATATATATATGTGTATGTGTGTGTG
TGTGTGTGTGTGTGTGTTTGACNAAATNTTXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTATTATTCGCTT
CACTCACTATTTTATTTACTTTGTAATATTACTTTTTCTACTATTTCGCT
TGTCACCACTTT

Query= MSMg01no135_m23.b1 MSMg01no135_m23.b1 CHROMAT_FILE:
MSMg01no135_m23.b1 PHD_FILE: MSMg01no135_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:01 2005
         (634 letters)



>mm_chr16_71251885_71252918
          Length = 1034

 Score = 1139 bits (589), Expect = 0.0
 Identities = 622/633 (98%), Gaps = 1/633 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccatattagcaactagctgatcccatattaaacaattttgtcagacacacctgaattac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccatattagcaactagctgatcccatattaaacaattttgtcagacacacctgaattac 260

                                                                       
Query: 61  tctaaaaatttacttaatcatgcattgtaattcaatgctaaaatctatttgaaaataaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaaaaatttacttaatcatgcattgtaattcaatgctaaaatctatttgaaaataaat 320

                                                                       
Query: 121 caatcaaaactcagtggcaaccttgtaataagaaaataagtaaaggatgcactatttcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatcaaaactcagtggcaaccttgtaataagaaaataagtaaaggatgcactatttcag 380

                                                                       
Query: 181 aagcagcagtgtactaaaaattggtaacttcagacattaacaccagaaatattactaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcagcagtgtactaaaaattggtaacttcagacattaacaccagaaatattactaaaa 440

                                                                       
Query: 241 atggtacagttattttgtgcttaactcactactctgaaaaatattcctttctgcttacag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggtacagttattttgtgcttaactcactactctgaaaaatattcctttctgcttacag 500

                                                                       
Query: 301 ttctttgaataaagttgttttaggtaacttaatcttattaaatacaccaagctttcctga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctttgaataaagttgttttaggtaacttaatcttattaaatacaccaagctttcctga 560

                                                                       
Query: 361 aattaattttatcaatttaatattaataataaataaccaacagtataaacatgtttattt 420
           |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 aattaattttataaatttaatattaataataaataaccaacagtataaa-atgtttattt 619

                                                                       
Query: 421 aaattttttataaattcaaattttggatttttaaattttggtggtaaagaaaaattgctt 480
           | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 620 acattttttataaattcaaattctggattttaaaattttggtggtaaagaaaaattgctt 679

                                                                       
Query: 481 taggtgacacaggtgtaacttagtagaaatgtaaacataaatatatttttggatgacttt 540
           |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 680 taggtgacactggtgtaacttagtagaaatataaacataaatatatttttggatgacttt 739

                                                                       
Query: 541 cttcaagacttttagacatttctgttttcataaattgtcagacgtgcagtttggtcttca 600
           ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||
Sbjct: 740 cttcaagacttttagacatttctgttttcataatttgtcagatatgcagtttggtcttca 799

                                            
Query: 601 tatgggtccggaaggactggaggatgggctatt 633
           |||||||||||||||||||||||| ||||||||
Sbjct: 800 tatgggtccggaaggactggaggaggggctatt 832


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)