Query= MSMg01no136_d02.b1 MSMg01no136_d02.b1 CHROMAT_FILE:
MSMg01no136_d02.b1 PHD_FILE: MSMg01no136_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:29 2005
(319 letters)
>mm_chr16_72733483_72734201
Length = 719
Score = 580 bits (300), Expect = e-170
Identities = 317/328 (96%), Gaps = 9/328 (2%)
Strand = Plus / Minus
Query: 1 ggttaggcagtaaatgaaaatgcatatcgaatttgaggctacatgtgaccacatggtgaa 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 479 ggttaggcagtaaatgaaaatgcatatcgaatttgaggctagatgtgaccacatggtgaa 420
Query: 61 atctattctcataaaacaccaaaataaattgattaaagaatatgagccatttaattaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atctattctcataaaacaccaaaataaattgattaaagaatatgagccatttaattaagg 360
Query: 121 aaaatagtagtcaaagaaattagaattgggagagaatagcttaaagtaaaactcgtgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aaaatagtagtcaaagaaattagaattgggagagaatagcttaaagtaaaactcgtgaac 300
Query: 181 taccttatgtggacagaaaataactgaactggagactgggatttaaatcttgaactggtt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 299 taccttatgtggacagaaaataactgaactggagactggggtttaaatcttgaactggtt 240
Query: 241 agctacttggacttggatacattgcttaactggttttt---------gaaagaagacaag 291
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 239 agctacttggacttggatacattgcttaactggtttttgcttctatagaaagaagacaag 180
Query: 292 ataatatctatattttattcatttagca 319
||||||||||||||||||||||||||||
Sbjct: 179 ataatatctatattttattcatttagca 152
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_d02.g1 MSMg01no136_d02.g1 CHROMAT_FILE:
MSMg01no136_d02.g1 PHD_FILE: MSMg01no136_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:29 2005
(619 letters)
>mm_chr16_72525478_72526497
Length = 1020
Score = 1143 bits (591), Expect = 0.0
Identities = 612/619 (98%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 1 atcacagtctgccccttgaagcaatccca-acagtgtcttgtctgtggtccctcaattgt 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 atcacagtctgccccttgaagcaatcccacacagtgtcttgtctgtggtccctcaattgt 260
Query: 60 agaactgcgtctccaggggcaattctacaaaaccacaatgtccatagcaggctaatggca 119
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 agaaccgcgtctccaggggcaattctacaaaaccacaatgtccatagcagactaatggca 320
Query: 120 tggataagcaccaaagcctgtgccttcaaagtcaatgaatgatgaacctttcgatgaaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 tggataagcaccaaagcctgtgccttcaaagtcaatgaatgatgaaccttttgatgaaat 380
Query: 180 ttacctttatataggggatcacatcctgtgttttatagtgaatgtcactatggacttgag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttacctttatataggggatcacatcctgtgttttatagtgaatgtcactatggacttgag 440
Query: 240 gtccagaaatgggaactattttacagaagcataaaatataaacagggcaacaatgtggaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccagaaatgggaactattttacagaagcataaaatataaacagggcaacaatgtggaa 500
Query: 300 aaactggacagtctgtgtcgatgagagcatgaaattataaggctgcgagggaaactggaa 359
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaactggacagtctgtgtcaatgagagcatgaaattataaggctgcgagggaaactggaa 560
Query: 360 ggtaaaattatcagatgctcagctttgaggtacaagctctgaagaatccagagatgcatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtaaaattatcagatgctcagctttgaggtacaagctctgaagaatccagagatgcatc 620
Query: 420 ctaaagaaatagttttcattcttattgtttataaattccataaatgtatgtaatcagttt 479
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaaagaaatagttttcattctcattgtttataaattccataaatgtatgtaatcagttt 680
Query: 480 tgatcacatctatcccctattgtaaatttaccctaccatttagggtaaatttacaaaatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgatcacatctatcccctattgtaaatttaccctaccatttagggtaaatttacaaaatc 740
Query: 540 ctgagtaacctctcaggggccagatccctggggaaaactgattctccctctcccagtagc 599
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 741 ctgagtaacctctcaggggccagatccctgaggaaaactgattctccctctcccagtagc 800
Query: 600 caactcctgtcagtaaata 618
|||||||||||||||||||
Sbjct: 801 caactcctgtcagtaaata 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1020
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1010
Effective search space: 615090
Effective search space used: 615090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
