GCGGGNTGGTCTATAATTGCGGCGCTATACGACTCACTATTTCCAGAGGA
TCCGCGGAATTCTCTGACCACCTTAGGCACTCACAAAAATGTGCTGTCAC
TAAGCTGAGTGGCGGTGCTGTGCAGGAAAGAGGTGTACTGGGAGGTTGAT
GGCAAAGTGACGCCTCAGGCGTGAGTGACTGAGAGATCATCAGTGTCTGG
AACTGCAATATGTTTCCAGGGTAACAGGTAGGGCAAAAGTCAAGACTACA
GAGGTCATGAAGTAAATAAGGGCTGTGTTTAACTGGGAACTGTGAATTTA
GATGCCTTTCTTAGCAAGGATAGAGATGGTCTAGGAATGGCTTTAGGGAA
AGCTTTCAAAGAAATAATGTTTATGTACAATCTTATAAAGGAAGTAATGA
TTCTCAGTCATTACTACCACACATCACTTCTATTTGTCCTCGTAATTCTT
CAACTTTTAATTATGTAAACAATGTAGAAGATACAAGTTGTTAGGTGAAA
ATTGAAGCCGAGGGCCTCAGATATCTGTGTTTGAGTTATGGATCAAGAAG
GCCACATCCAAGACAGCACAATCTGTTACCTTCCCTAACTGTGTAGTGAC
ACCCCATTGCTGAAGATGTCACACTTTGTCTATGTGACACAGGGAGATCA
ACCTCAAACTGATTAGGAAACTTCCCCACTGCTCTCTAGCTTTTAGA

CGCCNNNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTCCTAATGCTTACAG
AGCAAGCATTTTACTGACTGACCGGTTGATCTATCTCCCTAGTCCTTGTG
TCTTAGTCAGGGTTTTTATTGCTGGGAAGAGTCACCATGACCACAGAAGC
TCTTACAAGGGAGTATTTAATTGGATGTGGCTTACAGTTCAGAGGCTTAG
TTCACTATTACCTTGGTGAAAAGCATGGCGGGCATGCAGGTAGACATGAA
ACTGGAGAGGTAGCTAAGAGTTCTACATCCCAATTGCATCAGGCATCAGG
CATCAGGCATCAGGCATCAGGCATCAGGCATCAGGCATCAGGCATCAGGC
ATCAGGCATCAGGCATCAGGCATCAGGCACCAGGCATCAGGCAGCAGGCA
GCAGGCAGCAGGCAGCAGGCAGCAGGCAGCAGGCAGCAGGCAGCGAGTGA
CACTGGGCCTGGCTTGAGCATCTGAAACCCCAAAACTCATCCCCAGTGAC
ACACTTCCTCTAACAAGGCCATACCTCCTAATAGTGCCACTCCCTATGAG
CTTATGGGGAGTCATTAAAGTGATATTTTAATAAAAATGTATATACCACT
TAAGTTTTCAAAAGTTTAAGTTTTGTATCATCTTTTCTTTCTCTCT

Query= MSMg01no136_g15.b1 MSMg01no136_g15.b1 CHROMAT_FILE:
MSMg01no136_g15.b1 PHD_FILE: MSMg01no136_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:47 2005
         (645 letters)



>mm_chr16_55617487_55618533
          Length = 1047

 Score = 1183 bits (612), Expect = 0.0
 Identities = 636/644 (98%), Gaps = 2/644 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctgac-caccttaggcactca-caaaaatgtgctgtcactaagctgagtggc 61
           ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgacacacattaggcactcaacaaaaatgtgctgtcactaagctgagtggc 263

                                                                       
Query: 62  ggtgctgtgcaggaaagaggtgtactgggaggttgatggcaaagtgacgcctcaggcgtg 121
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtgctatgcaggaaagaggtgtactgggaggttgatggcaaagtgacgcctcaggcgtg 323

                                                                       
Query: 122 agtgactgagagatcatcagtgtctggaactgcaatatgtttccagggtaacaggtaggg 181
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 324 agtgactgagagatcatcagtgtctggaactgcaatacgtttccagggtaacaggtaggg 383

                                                                       
Query: 182 caaaagtcaagactacagaggtcatgaagtaaataagggctgtgtttaactgggaactgt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 384 caaaagtcaagactacagaggtcatgaagtaaataagggctgtgtttaactgggaactgg 443

                                                                       
Query: 242 gaatttagatgcctttcttagcaaggatagagatggtctaggaatggctttagggaaagc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaatttagatgcctttcttagcaaggatagagatggtctaggaatggctttagggaaagc 503

                                                                       
Query: 302 tttcaaagaaataatgtttatgtacaatcttataaaggaagtaatgattctcagtcatta 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttcaaagaaataatgtttatgtacaatcttataaaggaagtaatgattctcagtcatta 563

                                                                       
Query: 362 ctaccacacatcacttctatttgtcctcgtaattcttcaacttttaattatgtaaacaat 421
           ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 564 ctaccacacatcatttctatttgtcctcgtaattcttcaacttttaattaggtaaacaat 623

                                                                       
Query: 422 gtagaagatacaagttgttaggtgaaaattgaagccgagggcctcagatatctgtgtttg 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtagaagatacaagttgttaggtgaaaattgaagccgagggcctcagatatctgtgtttg 683

                                                                       
Query: 482 agttatggatcaagaaggccacatccaagacagcacaatctgttaccttccctaactgtg 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agttatggatcaagaaggccacatccaagacagcacaatctgttaccttccctaactgtg 743

                                                                       
Query: 542 tagtgacaccccattgctgaagatgtcacactttgtctatgtgacacagggagatcaacc 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tagtgacaccccattgctgaagatgtcacactttgtctatgtgacacagggagatcaacc 803

                                                       
Query: 602 tcaaactgattaggaaacttccccactgctctctagcttttaga 645
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tcaaactgattaggaaacttccccactgctctctagcttttaga 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1047
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1037
Effective search space:   658495
Effective search space used:   658495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)