TTTTTTTTTTTCTTTTTTTCTTTTTCTTTCTCTTCCTCTTTTTCTTTCTA
TCCTTATCTTCCTTCCTCTTCTTCANTAACTTCCTACCTCCTCCCCCCCT
CTTTTCCACTCCCTCCCCCCCCCCCCCCCCTATAATATAAACTTTCACCC
TAACTTTTATTTCATCCACTCCTAACACCCCACTCTTATTATTATACTCT
CTCTATACCTACTTTACACCTTTTATCTCCCCTTTCATACCCACTCCCTC
TAAAACTTAACACAACTCTACATCATCCTCTCCGTCTTACCTTCCTTAAA
AAAAATAATTTGGCGGGGCCCGGTCTTAAAATACGNAACNTCACNTAATT
ATGTCACAGCAAAGNAATCCGNNCGGGAAATTTCCTTTTGTTTTTACGCC
ACCTGAAAGNCCCCCATTTTTTTTAAATGGCGGGGTTTTATTTTTGAAAT
TTTTTCCTTGAGAAAGTCCCAACCCTCGTCCTTTTAAAAGCTACCAGGGG
GGGTAAAACCGGCCTCAAAGAAACCCAAAAGAAAAAGTGTGGCAAAAAAT
GGGGTTCGGGGATCATAAGGCTGAAAAAATTGCCCTCACCTTGCCTTATT
ATGATCATCATTTTACACCCTCACAAATACCCAATATTCACAAAAATATT
ATACACCCCAACACGAAAAACCCAATATTGTTATCTCTACCTATACTACT
CATATATAAAAAAAGCCTTTTATAACAAAAAAATATAATTAGCAACCTTC
ATCTTTCACCTCATTCGTAATTTGTACTTATACTTATACTATCCGCATCA
ATTACTTTTGCTCACCACATAN

CATTTTTTCCTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGACAGCAACTCCA
TCAGGGTAATATTTTGGAGACAAGAGATGATGCAGAGGCCACGGAGGAGC
GCTGTTTACTGGCTTGCTCTTCAAGGCTTGCTCAATTTGTTTTGTTATCC
ACCCCAGAACCACCAGCCCACTGAACACTATGGGCTAGGACTTCCCATGT
CAGTCATCAATCAAGAAAATGACCCACAGGCCAAAGTGTTGAGGGCATTG
TCTCAATTGACATTCTCTCTTCCAAAATGGCTCTGGCATGTGTCAATTTG
ACATAAAAACTAACCAGGACAGTCAGTGATATAACAGATGCTCAAACAGA
CTTTCTGAAGCAATGAAGAGAAAATGATGCCATAGCTTGTCGCTATATGC
ATATTTCTACAACCTACTATCCACTTTCCCCCCCAAATTCATTAATCAAC
TAACAGTTGTCCACATTAGGACCATGACTGACAATGCATACCCAGCTCTA
TTGAGAACAATGGCCCAAAAAATTCCGCCTTCCAAAAAAACAAAAACTCG
TTTGGGTCTCTTTAACACCCTCCGTTAATCTTTCATAATATACTTTTTTG
CCTACTCCTCCACCTCCCTCCTCCCCTTATCACCCCCTCC

Query= MSMg01no136_o02.g1 MSMg01no136_o02.g1 CHROMAT_FILE:
MSMg01no136_o02.g1 PHD_FILE: MSMg01no136_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:24 2005
         (459 letters)



>mm_chr16_50834019_50834876
          Length = 858

 Score =  853 bits (441), Expect = 0.0
 Identities = 453/457 (99%), Gaps = 1/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggacagcaactccatcagggtaatattttggagacaagagatgatgcagaggccacgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggacagcaactccatcagggtaatattttggagacaagagatgatgcagaggccacgga 260

                                                                       
Query: 61  ggagcgctgtttactggcttgctcttcaaggcttgctcaatttgttttgttatccacccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagcgctgtttactggcttgctcttcaaggcttgctcaatttgttttgttatccacccc 320

                                                                       
Query: 121 agaaccaccagcccactgaacactatgggctaggacttcccatgtcagtcatcaatcaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaccaccagcccactgaacactatgggctaggacttcccatgtcagtcatcaatcaag 380

                                                                       
Query: 181 aaaatgacccacaggccaaagtgttgagggcattgtctcaattgacattctctcttccaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaatgacccacaggccaaagtgttgagggcattgtctcaattgacattctctcttccaa 440

                                                                       
Query: 241 aatggctctggcatgtgtcaatttgacataaaaactaaccaggacagtcagtgatataac 300
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatggctctggcatgtgtcaatctgacataaaaactaaccaggacagtcagtgatataac 500

                                                                       
Query: 301 agatgctcaaacagactttctgaagcaatgaagagaaaatgatgccatagcttgtcgcta 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 agatgctcaaacagactttctgaagcaatgaagagaaaatgatggcatagcttgtcgcta 560

                                                                       
Query: 361 tatgcatatttctacaacctactatccactttcccccccaaattcattaatcaactaaca 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 tatgcatatttctacaacctactatccactttcccccc-aaattcattaatcaactaaca 619

                                                
Query: 421 gttgtccacattaggaccatgactgacaatgcatacc 457
           ||||||||||||||||||||||| |||||||||||||
Sbjct: 620 gttgtccacattaggaccatgacagacaatgcatacc 656


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 858
Length adjustment: 10
Effective length of query: 449
Effective length of database: 848
Effective search space:   380752
Effective search space used:   380752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)