Query= MSMg01no137_i22.b1 MSMg01no137_i22.b1 CHROMAT_FILE:
MSMg01no137_i22.b1 PHD_FILE: MSMg01no137_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:17 2005
(664 letters)
>mm_chr16_64495223_64496286
Length = 1064
Score = 1214 bits (628), Expect = 0.0
Identities = 655/664 (98%), Gaps = 4/664 (0%)
Strand = Plus / Minus
Query: 3 gaattcctttccctttc-ttattaatctttgaccatctcgtttgcatttggcatttttaa 61
|||||||||| || ||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 864 gaattccttttcc-ttctttattaatctttgaccatctcgtttgcatttggca-ttttaa 807
Query: 62 actcaggagaaatgtgaatgaaggaaaaacctttctacaaaatgatacttagaaaagttg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 actcaggagaaatgtgaatgaaggaaaaacctttctacaaaatgatacttagaaaagttg 747
Query: 122 aatttggaattaaaagtaaattcctttttaagttagctgggaatgaacaaacaaaaactg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aatttggaattaaaagtaaattcctttttaagttagctgggaatgaacaaacaaaaactg 687
Query: 182 aggcattaggatggcagtgtatgcaagaacaaatttttatacataccatatgcaatcttc 241
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 686 aggcattaggatggcagtgtatacaagaacaaatttttatacatactatatgcaatcttc 627
Query: 242 aggtattacaaagagaagtatggggaaggctttggaatattaagagagtgaatagtctgc 301
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 626 aggtattacaaagagaagtatggggaaggctttggaatagtaagagagtgaatagtctgc 567
Query: 302 tctaatccaaggtgaacacacctcacgcaaaggatgtttgactctggaacaataagtaca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tctaatccaaggtgaacacacctcacgcaaaggatgtttgactctggaacaataagtaca 507
Query: 362 tgtgatataagctatttggaaaaatctcccttatgggtattagaaataattgtttcttcc 421
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgtgatataagccatttggaaaaatctcccttatgggtattagaaataattgtttcttcc 447
Query: 422 ttatgttttaccttaagtaccactaatgttgacagtatttttattgatgtatgaagataa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttatgttttaccttaagtaccactaatgttgacagtatttttattgatgtatgaagataa 387
Query: 482 cgctcttttggttttttttttcccttaaaatcactccagagtctgtctgtttacacaact 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cgctcttttggttttttttttcccttaaaatcactccagagtctgtctgtttacacaact 327
Query: 542 caatactttccccagatctagaagctgcttgcctttcttcgttcacctagaaatgatctc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caatactttccccagatctagaagctgcttgcctttcttcgttcacctagaaatgatctc 267
Query: 602 aagaatctttctgaccca-ttttttaaacattcatcttgtgacttcatcacacatgccag 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aagaatctttctgacccatttttttaaacattcatcttgtgacttcatcacacatgccag 207
Query: 661 gaaa 664
||||
Sbjct: 206 gaaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_i22.g1 MSMg01no137_i22.g1 CHROMAT_FILE:
MSMg01no137_i22.g1 PHD_FILE: MSMg01no137_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:17 2005
(609 letters)
>mm_chr16_64328202_64329210
Length = 1009
Score = 1154 bits (597), Expect = 0.0
Identities = 606/609 (99%)
Strand = Plus / Plus
Query: 1 ttccacctacatcttggcttcctttggctgtcataaatagatgtagtgattattgatgcc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccacctacatcctggcttcctttggctgtcataaatagatgtagtgattattgatgcc 260
Query: 61 agagggtacaaactgtcctttgagggatcccagtttctcaaagaagagctcttcttggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagggtacaaactgtcctttgagggatcccagtttctcaaagaagagctcttcttggtc 320
Query: 121 acatctgcaattcagctaaaatgcccattaaatgtcacacaccttcctttgcttgatagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatctgcaattcagctaaaatgcccattaaatgtcacacaccttcctttgcttgatagc 380
Query: 181 gtaatgaaaagaaacttaatccaaagtactgctgagttttaaaggcctatgggaggccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaatgaaaagaaacttaatccaaagtactgctgagttttaaaggcctatgggaggccaa 440
Query: 241 agacttacatgcctgatatagggaatatattttatttattaaatctcttattatttattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agacttacatgcctgatatagggaatatattttatttattaaatctcttattatttattt 500
Query: 301 aacacttaattcttttacttaatatcttaagtttattcttggcacataataagagtaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacacttaattcttttacttaatatcttaagtttattcttggcacataataagagtaaca 560
Query: 361 cagtatagaaaagatcagttcataggtagttcaactcattatttacctgacttaagactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtatagaaaagatcagttcataggtagttcaactcattatttacctgacttaagactg 620
Query: 421 atatataaaatactttatcctgttgaatacacctatgaaagaactttgatttaaaaaaaa 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atacataaaatactttatcctgttgaatacacctatgaaagaactttgatttaaaaaaaa 680
Query: 481 aatctcaggattttgttaaaaatacatgaacattttttgaacaagaaacattttttctta 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 aatctcaggattttgttaaaaatacatgaacattttttgtacaagaaacattttttctta 740
Query: 541 acattaatttaccatggtttgcaaaacttgtatgtataattttaagaaagaataggtcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acattaatttaccatggtttgcaaaacttgtatgtataattttaagaaagaataggtcaa 800
Query: 601 aagaggaag 609
|||||||||
Sbjct: 801 aagaggaag 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
