Query= MSMg01no138_e17.b1 MSMg01no138_e17.b1 CHROMAT_FILE:
MSMg01no138_e17.b1 PHD_FILE: MSMg01no138_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:17 2005
(581 letters)
>mm_chr16_76661656_76662636
Length = 981
Score = 607 bits (314), Expect = e-178
Identities = 347/368 (94%), Gaps = 16/368 (4%)
Strand = Plus / Minus
Query: 4 ggaattcatcttaataacgttgtcatgaaataaagaaaaaagaccaagggtacagaaatg 63
|||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 352 ggaattcatcttaaaaatgttgtcatgaaataaagaaaagagaccaagggtacagaaatg 293
Query: 64 aactggggtgaatatgatctatttggaagaaattgtctctataaaactcaacaccaagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aactggggtgaatatgatctatttggaagaaattgtctctataaaactcaacaccaagaa 233
Query: 124 tagtgagtacatgtcaataagaaatattttaactatacccaagaaaacaggaaataaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tagtgagtacatgtcaataagaaatattttaactatacccaagaaaacaggaaataaaat 173
Query: 184 attcccacaccagtaaagccaaaaggaaggaacacacacacacacacacacacacacaca 243
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 172 attcccacaccagtaaagccaaaaggaagga----------------acacacacacaca 129
Query: 244 cacacacactatcatcaccaacatcaaaataacagattttaaaaatcattggtaattaat 303
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 128 cacacacactatcatcaccaacatcaaaataacagaaattaaaaatcattggtaattaat 69
Query: 304 ctctctcaacatccatggattcaattacccaataaaaataaacaggctaatgaaatggat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctctctcaacatccatggattcaattacccaataaaaataaacaggctaatgaaatggat 9
Query: 364 gtgaaaat 371
||||||||
Sbjct: 8 gtgaaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_e17.g1 MSMg01no138_e17.g1 CHROMAT_FILE:
MSMg01no138_e17.g1 PHD_FILE: MSMg01no138_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:17 2005
(562 letters)
>mm_chr16_76546082_76547040
Length = 959
Score = 1048 bits (542), Expect = 0.0
Identities = 556/562 (98%), Gaps = 3/562 (0%)
Strand = Plus / Plus
Query: 1 aggaactcctgagatcaaaggtttgatcactgtcatcttatggagctgctgggactgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaactcctgagatcaaaggtttgatcactgtcatcttatggagctgctgggactgaac 260
Query: 61 ccttgctccagagcaaactcccagagtcctgtagccaagttcccagccctgtaagaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttgctccagagcaaactcccagagtcctgtagccaagttcccagccctgtaagaaact 320
Query: 121 ttggaaccactagagccaaaactctgttcccatggtgaacactgttgcagtggaacatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggaaccactagagccaaaactctgttcccatggtgaacactgttgcagtggaacatgt 380
Query: 181 ttgcctatttggcacagtttcagaattttaagaacaacagtaaattcacaaggtccaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcctatttggcacagtttcagaattttaagaacaacagtaaattcacaaggtccaaga 440
Query: 241 gtttcaatgatagtaactcatggcacaatgctacctgcactgataatctagctgcagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttcaatgatagtaactcatggcacaatgctacctgcactgataatctagctgcagcaa 500
Query: 301 atacaggttcttttatcctctcattccaattataattatttctattaactcccatatcac 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacaggttcttttatcctttcattccaattataattatttctattaactcccatatcac 560
Query: 361 acaacacacagtaatgatgtctgtgtgctgtttttttttttttaaacaggaatgcaagtt 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 acaacacacagtaatgatgtctgtgtgctgttttttttttt---aacaggaatgcaagtt 617
Query: 421 aaagaggctgcagcagaatttaagagatgtccgaaatggtctgaagagaatcagtattga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaagaggctgcagcagaatttaagagatgtccgaaatggtctgaagagaatcagtattga 677
Query: 481 taatgaatcaaccaacagcaaggtgaaagacacaattgaggttcaaggtcaggaagcagt 540
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 678 taatgaatcaaccaacagcaaggtgaaagacacaatagaggttcaagggcaggaagcagt 737
Query: 541 gggtttggtccagatggccaaa 562
||||||||||||||||||||||
Sbjct: 738 gggtttggtccagatggccaaa 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 959
Length adjustment: 10
Effective length of query: 552
Effective length of database: 949
Effective search space: 523848
Effective search space used: 523848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
