Query= MSMg01no138_g09.b1 MSMg01no138_g09.b1 CHROMAT_FILE:
MSMg01no138_g09.b1 PHD_FILE: MSMg01no138_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:25 2005
(164 letters)
>mm_chr16_97296193_97296756
Length = 564
Score = 279 bits (144), Expect = 8e-80
Identities = 160/166 (96%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 1 ccaaccttcctgaaaagatgtgtctctgtcacattccttcaaatgtgtcaaatccaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ccaaccttcctgaaaagatgtgtctctgtcacattccttcaaatgtgtcaaatccaaatc 305
Query: 61 aactaaaatttccacgggataataggcttctttatgagctttccctgtgtggttagggat 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aactaaaatttccatgggataataggcttctttatgagctttccctgtgtggttagggat 245
Query: 121 -gggg-gcagtagggtggggagctggacagctggcctcttccatga 164
|||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 244 aggggtg--gtggggtggggagctggacagctggcctcttccatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no138_g09.g1 MSMg01no138_g09.g1 CHROMAT_FILE:
MSMg01no138_g09.g1 PHD_FILE: MSMg01no138_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:25 2005
(588 letters)
>mm_chr16_97151570_97152557
Length = 988
Score = 1122 bits (580), Expect = 0.0
Identities = 586/588 (99%)
Strand = Plus / Plus
Query: 1 agggttaaagcagaggccactggaagcagtggggaagtaggaagctggtacacagaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggttaaagcagaggccactggaagcagtggggaagtaggaagctggtacacagaaaga 260
Query: 61 gtcaaatggcagtctgcccttaggatgagagttagcaaggaaaggctacccactcactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaaatggcagtctgcccttaggatgagagttagcaaggaaaggctacccactcactgt 320
Query: 121 cacgtgccaattccaatcagcaagaagggaccctgcaatgcaatttgttctacttgatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacgtgccaattccaatcagcaagaagggaccctgcaatgcaatttgttctacttgatta 380
Query: 181 tagctcatttgactcacagtccatgttcatgatgatcaagtgcaaatcctacaaactgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagctcatttgactcacagtccatgttcatgatgatcaagtgcaaatcctacaaactgtg 440
Query: 241 tttaataataacgtggtgtccattaatgccttcattaatttgatttcctcctttaaaaca 300
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaacaagaacgtggtgtccattaatgccttcattaatttgatttcctcctttaaaaca 500
Query: 301 gaaactgttgataactaaatctaagccatgccatgtctttgggcttcagttcctcggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaactgttgataactaaatctaagccatgccatgtctttgggcttcagttcctcggttt 560
Query: 361 taaaggtagagaggttcagagaagagcctgcaaatccctgtggatgctcagtgcaagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaggtagagaggttcagagaagagcctgcaaatccctgtggatgctcagtgcaagaga 620
Query: 421 aagccatcttttcacttccttctgttaccagggcctacaaacacctggaaaaaccttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagccatcttttcacttccttctgttaccagggcctacaaacacctggaaaaaccttctt 680
Query: 481 tagattcagattttggtatcatctcaataagaattttgttttgtccaagatgagccacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagattcagattttggtatcatctcaataagaattttgttttgtccaagatgagccacaa 740
Query: 541 tgctaggttcttaggtttgttcatctgtcctttcttactcctgtcttt 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgctaggttcttaggtttgttcatctgtcctttcttactcctgtcttt 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
