NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATATAAAGCATGGTCATTTCAAGTTTGTATTGGAAATTGAA
TATTAATTTTGTTTTAAAGATAGTGTTTTAGTTTTCTTAAAAGGACTTAA
AGTATCTTGGCTTTGCTTTTGCAGAGTCATGAAAAAGTGTCTGCCATTCC
AGATGGAGTCTTGATGACAGACTAAAAAGGGGGAGTTATATGTAATACCA
ACTTGGCCAACCAATTGATTGGGCTTAATTAGAGGGTCACAGAGGAGGAG
AGATAGGAATATAACTGGTAAGAACAGCTGCATCATCATGAAATTCACCT
TATCCTTGTGATGCACCCATGAAGGTTGACAACAGTGTCTCTCTTCAGTT
CACCTTCCATTTCCTATATACTTTGTCATTCTCAAAGATAATAGCCATCC
AGGGGGAGGAAGGACATAACTGGATTCCTAGGAGGGAGTCAGCTGACGGT
CCTAGTACTATTCCAGTGGCCCTGGGTATTGCTGTATTTCATTGCTTCAG
ACCAACCATGTACAAGATGAAACACTCATCAAATTGTTCATGTACTACAT
TATAATTATAAATTGCATATAAGAGGATGGCTCAGCAAGTAAGAGTGAAT
ATTGCCTTTGTACCTCAAGCTTGGTTCTCAAATTGTGTGGCTTGCAACCA
TCTGTAACTCCAGA

CGTTCGCTCCGGTTCCTCCCCTNCTTTTTCGCTCGTCCGCCTCNGTCCCC
CTCACTTCTTTCTCTCTCTCCTCCCCTCTTTTTTCTTCTCTCTCCACTCG
ACTATCTCTCTCTTCTCACTTTCCCCTGGTTGACTTATTCTTGTGTATCC
ATCTCTCATTTCTTCCTCTTTTACCTTTACNTCTNCTCCCATATATATTC
TCCATGACGTCGATATTTAGTATTCTTAATTGATATATGATCGGCCGTAT
TCCGGTGTTGCTGTATGAAGTGTCAATGGNGCCTCCCACCCTTCGTGGGG
GTGTGCGCGCGTGGGCGGTGCTGTGCGTTGCTGTACTGCGCTTATTTCGT
TTTACACAGCGCACTCACGGAGTAGTCGACTATCTTCACTATTTATTCTT
GTTTCTTTGCGCGCGCGTATTTCCTGGGTTGTCTTCGCTTCATTTGATCT
CAACTACCATTTCGTACGCATTCGTGTTGCGTTGCCTGTGTAACCGCGTA
ACGTAGTGCACTNTTATTGANCACTTATATTCGCTGCAGTAGCCTGCGTC
AGTTATTTGACACATTGCGCTATAAGTTCGATAACGACTTCGGTGCAATT
GTGAGTCGTTGTGAGTGCCTGGAAACTACACTAATATCTCCGTTCTATAT
ATTCGTACTACACAGTACTATTTTGATTGCAAATGGACCACATAATCGTT
GTAATCGCAGCTTATTACATATCGTAGCATCGTGACAAANACTGAACGTC
GTGACGTGCTTAGGCGCCTNGCTGATGTATTGTACAACACACCGTATGTG
CAACAAATCTAATTCGATACGCGATTGTCTGTGACGCATCGTCACATGCG
TAATATTCGATANCGTTGTCGAGTNGACGTCGTGTCGATGCGTTAGCACG
CCTACACGATTGTAGAGTCGACTCTCGTACGCGGTATTATATGCCCGCAT
ATTTTCTGCTCGCCGCCTGCGTCACACTGTCGTATTCTACGGCAGCACCA
TGTGCCAATACCAGCTAATATGGTAATTATATAAATGCAAATATACATTC
ACAAACTAGTGAGNAGTATGCGCTCGAGATCCATTATTCGCCAACCTAGT
TTGCCNAACGTGCGCTCAGCGAACTCTGTCGATGTCAACGATATTAGCAC
NCTTNCGCGCCATGCTGAATATATACGCGTCGTTAGCGCACACGGTGTGC
CCGTGTGGCGGN

Query= MSMg01no140_k13.b1 MSMg01no140_k13.b1 CHROMAT_FILE:
MSMg01no140_k13.b1 PHD_FILE: MSMg01no140_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:27 2005
         (657 letters)



>mm_chr16_84031017_84032073
          Length = 1057

 Score = 1071 bits (554), Expect = 0.0
 Identities = 554/554 (100%)
 Strand = Plus / Minus

                                                                        
Query: 104  tatcttggctttgcttttgcagagtcatgaaaaagtgtctgccattccagatggagtctt 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 tatcttggctttgcttttgcagagtcatgaaaaagtgtctgccattccagatggagtctt 998

                                                                        
Query: 164  gatgacagactaaaaagggggagttatatgtaataccaacttggccaaccaattgattgg 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997  gatgacagactaaaaagggggagttatatgtaataccaacttggccaaccaattgattgg 938

                                                                        
Query: 224  gcttaattagagggtcacagaggaggagagataggaatataactggtaagaacagctgca 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937  gcttaattagagggtcacagaggaggagagataggaatataactggtaagaacagctgca 878

                                                                        
Query: 284  tcatcatgaaattcaccttatccttgtgatgcacccatgaaggttgacaacagtgtctct 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877  tcatcatgaaattcaccttatccttgtgatgcacccatgaaggttgacaacagtgtctct 818

                                                                        
Query: 344  cttcagttcaccttccatttcctatatactttgtcattctcaaagataatagccatccag 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817  cttcagttcaccttccatttcctatatactttgtcattctcaaagataatagccatccag 758

                                                                        
Query: 404  ggggaggaaggacataactggattcctaggagggagtcagctgacggtcctagtactatt 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757  ggggaggaaggacataactggattcctaggagggagtcagctgacggtcctagtactatt 698

                                                                        
Query: 464  ccagtggccctgggtattgctgtatttcattgcttcagaccaaccatgtacaagatgaaa 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697  ccagtggccctgggtattgctgtatttcattgcttcagaccaaccatgtacaagatgaaa 638

                                                                        
Query: 524  cactcatcaaattgttcatgtactacattataattataaattgcatataagaggatggct 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637  cactcatcaaattgttcatgtactacattataattataaattgcatataagaggatggct 578

                                                                        
Query: 584  cagcaagtaagagtgaatattgcctttgtacctcaagcttggttctcaaattgtgtggct 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577  cagcaagtaagagtgaatattgcctttgtacctcaagcttggttctcaaattgtgtggct 518

                          
Query: 644  tgcaaccatctgta 657
            ||||||||||||||
Sbjct: 517  tgcaaccatctgta 504


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)