ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAAATCCGCGGAA
TTCTTTGATATTACAGTGTAAAGATCCTTGGAATTTGTAACTTATTAGAC
TTAGTCACCTAGAAAATTAATCTAATTACTGGAAGTATTCTTAAATTTCC
TCATGGCCTTCATCTGAGCGTTTCGCCTGTTTAGATTTCAATGACCAAAT
CCTTTCATACTGTAATTAAGTTGGAAAGAATTACTGATTTTTCTGCAGGA
GTGATATTGCAAATGTATAATCCTAGATCATCTATCATTATGGCAGAACA
TTGTTAGAAGCCAACAAAACGAAGTTTGGTTGTTTGAATGCCAGAAGACA
CGTGAGAGTTTGGCTTCTCTGTCTTTCCTTAGTCATAGGCAGCTTTATAT
CTTTGCCCAAATTGCCACTGCTTATTCTTCTCTTCTTAAATTTCCCCTGA
CTTTCAGTTATAGCCATTAAAGAAGTACATACTATGCAATATCCTATTCT
TCTGATTATGTAGTCATTGCTAATATATATATATATATATATATATATAT
ATATATATATAGTATGCATGTACATACATATGTATGTATGTAGGTATGTA
TGTACAAAACTCTGTACTTCAAATATCCCCAGGATTTCTATTAATCAATA
GATACTCTCCTAGATAATGCTATCTCCTCTGACTCTTACAGGAGAGGGGC
AGTCAACTATTTCCTATGGAGCAT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGAAAAT
CAGTCTGGTGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCC
ACAATACCTCTCCTGGGCATATATCCAGAAAATGCCCCAACTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTACTAGCCAAATGGATGGACCTGAAGGGCAATATCCTGAGTG
AGGTAACCTAATCACAAAGGAACTCACACAATATGTACTCAATGATAAGT
GGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGATCCAATTGGC
AAAACATGAAACTCAAGCAGAACGAAGA

Query= MSMg01no140_m23.b1 MSMg01no140_m23.b1 CHROMAT_FILE:
MSMg01no140_m23.b1 PHD_FILE: MSMg01no140_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:39 2005
         (651 letters)



>mm_chr16_83999483_84000534
          Length = 1052

 Score = 1064 bits (550), Expect = 0.0
 Identities = 615/652 (94%), Gaps = 27/652 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgat-attacagtgtaaagatccttggaatttgtaacttattagacttagtc 63
           |||||||||||| | || || ||||||||||||||||||||||||||| |||||||||||
Sbjct: 684 gaattctttgataagtatagcgtaaagatccttggaatttgtaacttactagacttagtc 625

                                                                       
Query: 64  acctagaaaattaatctaattactggaagtattcttaaatttcctcatggccttcatctg 123
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acctaggaaattaatctaattactggaagtattcttaaatttcctcatggccttcatctg 565

                                                                       
Query: 124 agcgtttcgcctgtttagatttcaatgaccaaatcctttcatactgtaattaagttggaa 183
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agcgtttcacctgtttagatttcaatgaccaaatcctttcatactgtaattaagttggaa 505

                                                                       
Query: 184 agaattactgatttttctgcaggagtgatattgcaaatgtataatcctagatcatctatc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agaattactgatttttctgcaggagtgatattgcaaatgtataatcctagatcatctatc 445

                                                                       
Query: 244 attatggcagaacattgttagaagccaacaaaacgaagtttggttgtttgaatgccagaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attatggcagaacattgttagaagccaacaaaacgaagtttggttgtttgaatgccagaa 385

                                                                       
Query: 304 gacacgtgagagtttggcttctctgtctttccttagtcataggcagctttatatctttgc 363
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacatgtgagagtttggcttctctgtctttccttagtcataggcagctttatatctttgc 325

                                                                       
Query: 364 ccaaattgccactgcttattcttctcttcttaaatttcccctgactttcagttatagcca 423
           ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 324 ccaaattgccactgcttattcctctcttcttaaatttcccctgacttttagttatagcca 265

                                                                       
Query: 424 ttaaagaagtacatactatgcaatatcctattcttctgattatgtagtcattgctaatat 483
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
Sbjct: 264 ttaaagaagtacatactatgcaatatcctattcttctgattatttagtcattgcta---- 209

                                                                       
Query: 484 atatatatatatatatatatatatatatatatatagtatgcatgtacatacatatgtatg 543
                             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ------------------atatatatatatatatagtatgcatgtacatacatatgtatg 167

                                                                       
Query: 544 tatgta-g---gtatgtatgtacaaaactctgtacttcaaatatccccaggatttctatt 599
           |||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tatgtatgtatgtatgtatgtacaaaactctgtacttcaaatatccccaggatttctatt 107

                                                               
Query: 600 aatcaatagatactctcctagataatgctatctcctctgactcttacaggag 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 aatcaatagatactctcctagataatgctatctcctctgactcttacaggag 55


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space:   667922
Effective search space used:   667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)