Query= MSMg01no142_g03.b1 MSMg01no142_g03.b1 CHROMAT_FILE:
MSMg01no142_g03.b1 PHD_FILE: MSMg01no142_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:59 2005
(642 letters)
>mm_chr16_97445860_97446901
Length = 1042
Score = 1152 bits (596), Expect = 0.0
Identities = 629/640 (98%)
Strand = Plus / Minus
Query: 1 atatattcctgcctggcccttgaataaataggataaaatttgaattgagcaacaactggg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 atatattcatgcctggcccttgaataaataggataaaatttgaattgagcaacaactggg 781
Query: 61 cttgtcattaaactgagtatatgaaaatggacaagaaagttaagatgcatctacgctcaa 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 780 cttgtcattaaactgagtatgtgaaaatggacaagaaagttaagatgcatctacgctcaa 721
Query: 121 gaacacatagttcttagtaacgaatgcagccataacatttaccagaaattcataaagcaa 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 720 gaacacatagttcttagtaacgaacgcagccataacatttaccagaaattcataaagcaa 661
Query: 181 ggggtaacaattaaaaagttacagaattgattggggaaacagaaaacattgttacaagca 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ggggtaacagttaaaaagttacagaattgattggggaaacagaaaacattgttacaagca 601
Query: 241 gtatgtttaaagagattctcagtttgaaccttggaattttcttgcaaatgaaaaacattg 300
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 600 gtatgtttaaagagattctcagtttgaaccttggaatttccttgcaaatgagaaacattg 541
Query: 301 gagagggaaataatcaagagactgaatactatgtaagtggatgaaggaaaatgtaaggat 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 540 gagagggaaataatcaagagactgactactatgtaagtggatgaaggaaaatgtaaggat 481
Query: 361 atatatggggttctcaaacaattgacaaaccctgtgcgaacatgcatacttatgaagata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atatatggggttctcaaacaattgacaaaccctgtgcgaacatgcatacttatgaagata 421
Query: 421 tacatcggcatctatctttattgttatacacaggctctgagtatttgcctgtgttttccc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 420 tacatcggcatctatctttattgttatacacaggctctgagtatttgcctgtgttttctc 361
Query: 481 tggggcacctgagctaaaatctgcacttggccacaaaataacaaaaaaagtagttcaaca 540
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttgggcacctgagctgaaatctgcacttggccacaaaataacaaaaaaagtagttcaaca 301
Query: 541 tttattcttgaagactagatgtcacctcagacactttataatgcatctcaaagaccagag 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 300 tttattcttgaagactagatgtcacctcagacactttgtaatgcatctcaaagaccagag 241
Query: 601 gtgacaacatcaagataacctcaaaggtatgcaaatctga 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtgacaacatcaagataacctcaaaggtatgcaaatctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no142_g03.g1 MSMg01no142_g03.g1 CHROMAT_FILE:
MSMg01no142_g03.g1 PHD_FILE: MSMg01no142_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:59 2005
(701 letters)
>mm_chr16_97296425_97297523
Length = 1099
Score = 1236 bits (639), Expect = 0.0
Identities = 685/701 (97%), Gaps = 2/701 (0%)
Strand = Plus / Plus
Query: 1 cttttgaaaaccaaattaagctgtactgcctggaagtaactactggcatatttcaaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttgaaaaccaaattaagctgtactgcctggaagtaactactggcatatttcaaatta 260
Query: 61 aatcaactcaggattacccattttcaagagagagcaagaagatattgccaggcacagtat 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 aatcaactcaggattacccattttcaagagagagcaagaagatatcaccaggcacagtat 320
Query: 121 ttgtagaactttagtgaaaatctctccttgaggagacagacaaaactaagatgctaccat 180
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 321 ttgtagaactttagtgaaaatctctccttgaggagatagacaaaactgagatgctaccat 380
Query: 181 aaggaacccctgcaaccctttagggaatgccccagagccagagtaggtatgtggcccatc 240
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggaacccctgcgacccttcagggaatgccccagagccagagtaggtatgtggcccatc 440
Query: 241 tctctctctccatggctatttgcacgtaagtgagatctgttttgagatattgttagagtg 300
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tctctctc--catggctatttgcacgtaagtgagatctgcagtgagatattgttagagtg 498
Query: 301 ttgctaaggcaacaggactgcaggagatgatgaaataggaaccagaatccacactgctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttgctaaggcaacaggactgcaggagatgatgaaataggaaccagaatccacactgctcc 558
Query: 361 agagcctatgtcaccaatgtctcatctgtatacaaggggtgcttaaagagtcttattgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 559 agagcctatgtcaccaatgtctcatctgtatacaaggggtgcttaaagaatcttattgaa 618
Query: 421 aatgccatgcatacaactagcttaggtgttgtgtggtttctcttcactgacaagtcgaca 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 619 aatgccatgcatacaactagcttaggtgttgtgtggttcctcttcactgacaagtcgaca 678
Query: 481 agatttagcatcaccatggaaacacatctctgtgtatgagggtattttctgaaaggttta 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agatttagcatcaccatagaaacacatctctgtgtatgagggtattttctgaaaggttta 738
Query: 541 aatgagcagagaagacccatactaaatgtgagctagttctttcccatgggctgggctttg 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 739 aatgagcagagaagacccatactaaatgtgagctagtcctttcccatgggctgggctttg 798
Query: 601 gcctgaatcaaaagaagaaagcgatctgagcactaattcatttctctctgctgcatgact 660
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gcctgaatcaaaaggagaaagcgatctgagcactaattcatttctctctgctgcatgact 858
Query: 661 acagatgacctcacactcctgctaccatgatagacacactg 701
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 acagatgacctcacactcctgctaccatgatagacacactg 899
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1099
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1089
Effective search space: 752499
Effective search space used: 752499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
