Query= MSMg01no142_o04.b1 MSMg01no142_o04.b1 CHROMAT_FILE:
MSMg01no142_o04.b1 PHD_FILE: MSMg01no142_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:08 2005
(729 letters)
>mm_chr16_67363903_67365029
Length = 1127
Score = 1288 bits (666), Expect = 0.0
Identities = 714/730 (97%), Gaps = 3/730 (0%)
Strand = Plus / Plus
Query: 1 tataatcatctgtaatgtggtctgatgccctcctctggttttctaaaggcacctacagtg 60
||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||
Sbjct: 200 tataaccatctgtaatgtggtctgatgccctcttctggttttctgaaggcagctacagtg 259
Query: 61 tactcatatacatagaaaataaataa-taattatttaaaagaattgaagaagctatattt 119
|| | ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||
Sbjct: 260 tattaatatacatagaaaataaataaataaatatttaagagaattgaagaagctatattt 319
Query: 120 gcttacttacaaatctgaaagagacaattacaaacattaacaaatggaaaaaaaatcctc 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 320 gcttacttacaaatctgaaagagacaattacaaacattaacaaatggaaaaaaa-tcctc 378
Query: 180 aatgcttgtgtgtctaagaacaaatcacttaaattacgtcagagagatttcatgatagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aatgcttgtgtgtctaagaacaaatcacttaaattacgtcagagagatttcatgatagaa 438
Query: 240 ccctccagattgttaatctgcatttttttttcaagtacagcatccatcctgcaacgttaa 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 439 ccctccagattgttaatctgcatttttttt-caagtacagcatccatcctgcaacgttaa 497
Query: 300 agagttttttcctttacttacccacaggacattaataaaggagcatataatacttatatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agagttttttcctttacttacccacaggacattaataaaggagcatataatacttatatc 557
Query: 360 catgatttctgctttgttaccttcagttactcacctataaaaacaagaagggggagaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 catgatttctgctttgttaccttcagttactcacctataaaaacaagaagggggagaaaa 617
Query: 420 aagagtacattgttaatattaacgtatgctaattttaatatgagagcatcatgatatacc 479
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 618 aagagtacattgttaatattaacatatgctaattttaatatgagagcatcatgatatacc 677
Query: 480 ctattattccctatcatctatagtttgatattttatataacaaagtatatcagtgtttta 539
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctattattccctattatctatagtttgatattttatataacaaagtatatcagtgtttta 737
Query: 540 ttgttttaagattttagaaaaaaatttctctgcaaacttactagaaaaatatcaataata 599
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttgttttaagattttagagaaaaatttctctgcaaacttactagaaaaatatcaataata 797
Query: 600 aaaattccccttactacctgagaaaaaaattttaatactgtccgtacgttgcattttagc 659
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 798 aaaattccccttactacctgagaaaaatattttaatactgtccgtacattgcattttagc 857
Query: 660 atgtttttaaataacttcattaaaagtaatgtcacagttaggcatttgttccctgtcatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 atgtttttaaataacttcattaaaagtaatgtcacagttaggcatttgttccctgtcatc 917
Query: 720 tgagttggtg 729
||||||||||
Sbjct: 918 tgagttggtg 927
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 729
Length of database: 1127
Length adjustment: 10
Effective length of query: 719
Effective length of database: 1117
Effective search space: 803123
Effective search space used: 803123
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no142_o04.g1 MSMg01no142_o04.g1 CHROMAT_FILE:
MSMg01no142_o04.g1 PHD_FILE: MSMg01no142_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:08 2005
(384 letters)
>mm_chr16_67452592_67453375
Length = 784
Score = 704 bits (364), Expect = 0.0
Identities = 373/376 (99%)
Strand = Plus / Minus
Query: 5 caggcacttccaaatgcaaatactccacttgagacaacataacacctgttgctctccttg 64
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 580 caggcaattccaaatgcaaatactccacttgagacaacagaacacctgttgctctccttg 521
Query: 65 attatgtctttaggcccccttttcaagtaaatgagagaaaggaagaagaaaaaagatgtt 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 attatgtctttaggcctccttttcaagtaaatgagagaaaggaagaagaaaaaagatgtt 461
Query: 125 cttttgatgagttagttcctcagaggattaaacccagggcgaaatgctcagtggtaccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cttttgatgagttagttcctcagaggattaaacccagggcgaaatgctcagtggtaccca 401
Query: 185 tctataatgccttccttgccttgagtaattacaaagcacttagcattattgggtgataag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tctataatgccttccttgccttgagtaattacaaagcacttagcattattgggtgataag 341
Query: 245 ggaagttacaatatgtttcctgccttccacagaacacttaacagagaactggtttgtggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggaagttacaatatgtttcctgccttccacagaacacttaacagagaactggtttgtggt 281
Query: 305 ttctttaggaaagtgtctattgtacctctattgagctaattattatttttattttggtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttctttaggaaagtgtctattgtacctctattgagctaattattatttttattttggtgg 221
Query: 365 ggtttgtttttggggg 380
||||||||||||||||
Sbjct: 220 ggtttgtttttggggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
