CCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGTATTTTCGGCAAGAAGGGACGGAATGGCCACTAAGCGTGACCACA
AGAAAGCTGCCCCACTTCTTCAGGGCCACTGGGCCTGCCTACAGCATCCA
GAGAGCTTTGTAATTTCAGTTCATGGCCAGCCTTTTTCTTCCTCCGCCAT
CAACCTGCTAATGCTTTTCTAATAATTACCATTTTTTGAAACTATTTTGG
CTGTTAAAAATGTTTCTTTTTAATAAGCTGATTAAACGAGCCTGCTTATT
AGCATAAGCCTTTTGCTGTTCAGCCCTCTCCCTAATTAAAAGCACTCATC
TGTGCAGACCTGGATTTCTCCCCTTCGGTCTGCGATAGGCTTTTGGATAG
TTTTTCCTTGCGGATTTTTTTTTCTTTTACTCTTGTTTCTTTTGGTTGTT
TGCTACTCCTGAATCCCACAGAGAGATAAACAGCTGAGCAAAATTAAACA
GGGCAGCGTATATGGTCTACGTATCTGCATGAAAATGGTGGTCACACAGA
GTTTAAAAGGAAGGCTCTACTTTTATAAGAGTCATATAAAGCTCCCAACA
TTACAAGCTATCAACAGTGATATGTGATGATAAGAAGCAAGGAATGCCAT
TCCCCTGTTCTTTCCTTAGTGGTATCTTCCTAACTTCCACAGATGCCCTT
GGGAACN

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGTATTGTCAGAAATAATACACATCTC
AGCCTCGGGGTGTTGTGTTCTGTGGCTGAGAGGAGAAAAGGGAGGGAAGA
GAAAGGAGGAAAGAAACAAAGAGGAAAGGAGCAAGGAAGGGAGAATTAGG
AAGTACCCACAGCTGTGTGGAGCCCGGTCTCTGGGATAATAAAATTAGGG
GATGAAAATGAGTCATGGCATCAGCACTATAAGTCAGGTGCTCTGTCCTA
CAGTAGGAATTATATTTTTTTTTATCCTTACTAATGCTGCGACTTTTTAA
NACGTCTCCTCGTGTCCGTGTGACTCTATATCTTATTTCTATTTTCTTTC
GTTTTTTTTTGTCCCCCCTTCGCTTCTTGTCTTCTATTGCTTTGCTCACC
CTCTGTTCTTTCTTTTTCCCTTCCTTTTTCTTTTCTGTCTCTGGTCTTCC
TCTCTTTTTTCTCGTCCTTGTTGTATCTTCCTCTTTCGTCCTCCCAACTT
TTTTTGTTCTTTTGTTTTGTTTTCTTTTCTTGCTTCTTATTTTCTTCTCC
TATCTTTGCTCTTCCTTGCGCTTTTTTTTTCTTTGTTCTAATACCATCTT
CCCCCTTTTTTTTCTCCTTTTTCTTTCCCATCCATTCTCTTTTTTTCTTT
TTTTTTTATTATTCCTGTCGTCTTTATTTCTTCTTGTGTGT

Query= MSMg01no143_b15.b1 MSMg01no143_b15.b1 CHROMAT_FILE:
MSMg01no143_b15.b1 PHD_FILE: MSMg01no143_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:33 2005
         (659 letters)



>mm_chr16_41733578_41734636
          Length = 1059

 Score = 1237 bits (640), Expect = 0.0
 Identities = 652/656 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagtattttcggcaagaagggacggaatggccactaagcgtgaccacaagaaag 63
           ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtattttgggcaagaagggacagaatggccactaagcgtgaccacaagaaag 263

                                                                       
Query: 64  ctgccccacttcttcagggccactgggcctgcctacagcatccagagagctttgtaattt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgccccacttcttcagggccactgggcctgcctacagcatccagagagctttgtaattt 323

                                                                       
Query: 124 cagttcatggccagcctttttcttcctccgccatcaacctgctaatgcttttctaataat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagttcatggccagcctttttcttcctccgccatcaacctgctaatgcttttctaataat 383

                                                                       
Query: 184 taccattttttgaaactattttggctgttaaaaatgtttctttttaataagctgattaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taccattttttgaaactattttggctgttaaaaatgtttctttttaataagctgattaaa 443

                                                                       
Query: 244 cgagcctgcttattagcataagccttttgctgttcagccctctccctaattaaaagcact 303
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agagcctgcttattagcataagccttttgctgttcagccctctccctaattaaaagcact 503

                                                                       
Query: 304 catctgtgcagacctggatttctccccttcggtctgcgataggcttttggatagtttttc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catctgtgcagacctggatttctccccttcggtctgcgataggcttttggatagtttttc 563

                                                                       
Query: 364 cttgcggatttttttttcttttactcttgtttcttttggttgtttgctactcctgaatcc 423
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cttgctgatttttttttcttttactcttgtttcttttggttgtttgctactcctgaatcc 623

                                                                       
Query: 424 cacagagagataaacagctgagcaaaattaaacagggcagcgtatatggtctacgtatct 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cacagagagataaacagctgagcaaaattaaacagggcagcgtatatggtctacgtatct 683

                                                                       
Query: 484 gcatgaaaatggtggtcacacagagtttaaaaggaaggctctacttttataagagtcata 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gcatgaaaatggtggtcacacagagtttaaaaggaaggctctacttttataagagtcata 743

                                                                       
Query: 544 taaagctcccaacattacaagctatcaacagtgatatgtgatgataagaagcaaggaatg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taaagctcccaacattacaagctatcaacagtgatatgtgatgataagaagcaaggaatg 803

                                                                   
Query: 604 ccattcccctgttctttccttagtggtatcttcctaacttccacagatgcccttgg 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ccattcccctgttctttccttagtggtatcttcctaacttccacagatgcccttgg 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)