Query= MSMg01no143_o01.b1 MSMg01no143_o01.b1 CHROMAT_FILE:
MSMg01no143_o01.b1 PHD_FILE: MSMg01no143_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:32 2005
(347 letters)
>mm_chr16_29062227_29062974
Length = 748
Score = 619 bits (320), Expect = 0.0
Identities = 338/344 (98%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 aatttgcaggccattgtggtacaggatcacttataccaagcattagtaggagcctcacct 60
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatttgcaggtcattgcggtacaggatcacttataccaagcattagtaggagcctcacct 260
Query: 61 ttatattcccatttcacacacataaaatactctttaatgtaaatagcttctcatgagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatattcccatttcacacacataaaatactctttaatgtaaatagcttctcatgagcag 320
Query: 121 agagctttgctattactaattttttccctcactgagggaagtacccc-atgtgacctaac 179
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 agagctttgctattactaattttttccctcactgagggaagtaccccgatgtgacctaac 380
Query: 180 gtagtgatggcagtacatttgcatattgtttctttagtttttccctgatgcaaagctata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtagtgatggcagtacatttgcatattgtttctttagtttttccctgatgcaaagctata 440
Query: 240 caaaccttcctttttctatgctgtggggagagatggctgactccagcaagcctgcaaagc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaccttcctttttctatgctgtggggagagatggctgactccagcaagcctgcaaagc 500
Query: 300 cgatggaatggattatatttttaaaggtgttgcaatgtgccaca 343
| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 501 caatggaatggattatatttttaaagatgttgtaatgtgccaca 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 748
Length adjustment: 9
Effective length of query: 338
Effective length of database: 739
Effective search space: 249782
Effective search space used: 249782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_o01.g1 MSMg01no143_o01.g1 CHROMAT_FILE:
MSMg01no143_o01.g1 PHD_FILE: MSMg01no143_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:32 2005
(403 letters)
>mm_chr16_29242167_29242970
Length = 804
Score = 719 bits (372), Expect = 0.0
Identities = 396/404 (98%), Gaps = 1/404 (0%)
Strand = Plus / Minus
Query: 1 agtgctttag-aaaatagtgattcatttcatcataattaattgcaaacaaacatattcct 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agtgctttagaaaaatagtgattcatttcatcataattaattgcaaacaaacatattcct 545
Query: 60 tctcctttttaaacaactaaatatttacctatgttttctaatgaatgaaacccagaatgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tctcctttttaaacaactaaatatttacctatgttttctaatgaatgaaacccagaatgc 485
Query: 120 acgacaatgatagacaatattgcccaaaagtatatttataaacaacccttgtagaagctt 179
| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aggacaatgatagataatatcgcccaaaagtatatttataaacaacccttgtagaagctt 425
Query: 180 tcacttaaattgtttttaaatatactttgggctgttggtgaaatggtcttggaaagcttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcacttaaattgtttttaaatatactttgggctgttggtgaaatggtcttggaaagcttc 365
Query: 240 tatgatatgaagaaaatactcctttgtttgcattaatcatgagggattgtaacatccagt 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 364 tatgatatgaagaaaatactcctttgtttgcattaatcaggagggattgtaacatccagt 305
Query: 300 gtaggagacagatttcagcaaatgccttcataccatctactacacacatactattttgtg 359
|||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 304 gtaggagacagatttcagcaaatgccttcataccatctactaaataaatactattttgtg 245
Query: 360 tcttcttatctaatactacaggtgcgttatattaatatttttgt 403
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcttcttatctaatactacaggtgcgttatattaatatttttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 804
Length adjustment: 9
Effective length of query: 394
Effective length of database: 795
Effective search space: 313230
Effective search space used: 313230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
