NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGATCCGCGG
AATTCCTGATCTTTCCAAACTTTTATCATGAATGGGTGTTGGATCTTGTC
AAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGA
ATTTGTTTATATAATGGATTGCATTGATGGATTTTCGTATATTAAACCAT
CCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTT
AATGTGTTCTTGGATTCGGTTAGCCAGAATTTTATTGAGGATTTTTGCAT
CGATATTCACATTTTTCTTTTTTTTTCCCCATTTTTATTAGGTATTTACC
TCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCCCCC
ACTCCCCTACCCACCCATTCCCATTTTTTTGGCCCTGGCGTTCCCCTGTA
CTGGGGCATATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCAGTGATG
GCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCG
GGGTACTGGTTAGTTCATAATGTTGTTCTACCTATAGGGTTGCAGATCCC
TTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGAT
CCATTCAATACCTGAATGTGAGCATCCATTTCTGTGTTTGCTAAGA

NCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAACTTTATTATCCAAGGGTTTCTCT
TCTCCTACTTAAAAGGAAAAAAAAAATCAAGACTGTGTGGGCTCCATTTA
TAGTGTCTTATCATAATGACAAGCTATTCAAAACTGCTTTCTTCATTTGC
TAATTGGCTGTCACCACTCAGCTATAATAAAACCTAAAATATGGAAAATA
GTTATCTGAGGATCCAGATGCTAGGGATGTTAATGCTCATGAATACTCCC
ATTGAGGACCTGGAGTTCAATGTCAGGTTGAAGGCACAAACGAGGAGATG
CATCTGCATGAACAATCTCGTGGGTGGAATTATGTGGCTTACATCTGATG
AATGCCTGCGATTTACTAGGAAACTGAATATAATAAACTTTCTCTCAAAT
GTATATAAGATAATTGAGATTATTATTACAAATAAAACGAAGCAACATGT
GTAAATGTATTTTGAAATACTATGGAAATATAAGTTTGCTGTTAGCTAGG
AGAGAGTGGCAAAGAGAGAAAGGAAGACTATTAATTCTTTAAAAAATTTT
TACATTTATTTGCTTTACGTGTTTTGAGTGTTTTGCCTACAGATATGTAT
GTGTACCATATGTGTGCCTGGTGTCTCTTTGTAAGCCAGAAGTAAGCAT

Query= MSMg01no145_b14.g1 MSMg01no145_b14.g1 CHROMAT_FILE:
MSMg01no145_b14.g1 PHD_FILE: MSMg01no145_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:06 2005
         (520 letters)



>mm_chr16_84420413_84421330
          Length = 918

 Score =  953 bits (493), Expect = 0.0
 Identities = 513/521 (98%), Gaps = 4/521 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caactttattatccaagggtttctcttctcctacttaaaaggaaaaaaaaaatcaagact 60
           ||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||
Sbjct: 201 caactttattatctaagggtttctcttctcctacttaaaaggaaaaaaa---tcaagact 257

                                                                       
Query: 61  gtgtgggctccatttatagtgtcttatcataatgacaagctattcaaaactgctttcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtgtgggctccatttatagtgtcttatcataatgacaagctattcaaaactgctttcttc 317

                                                                       
Query: 121 atttgctaattggctgtcaccactcagctataataaaacctaaaatatggaaaatagtta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atttgctaattggctgtcaccactcagctataataaaacctaaaatatggaaaatagtta 377

                                                                       
Query: 181 tctgaggatccagatgctagggatgttaatgctcatgaatactcccattgaggacctgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tctgaggatccagatgctagggatgttaatgctcatgaatactcccattgaggacctgga 437

                                                                       
Query: 241 gttcaatgtcaggttgaaggcacaaacgaggagatgcatctgcatgaacaatctcgtggg 300
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 438 gttcaatgtcaggttgaaggcacaaacaaggagatgcatctgcatgaacaatctcgtggg 497

                                                                       
Query: 301 tggaattatgtggcttacatctgatgaatgcctgcgatttactaggaaactgaatataat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tggaattatgtggcttacatctgatgaatgcctgcgatttactaggaaactgaatataat 557

                                                                       
Query: 361 aaactttctctcaaatgtatataagataattgagattattattacaaataaaacgaagca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaactttctctcaaatgtatataagataattgagattattattacaaataaaacgaagca 617

                                                                       
Query: 421 acatgtgtaaatgtattttgaaatactatggaaatataagtttgctgttagctaggagag 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 618 acatgtgtaaatgtattttgaaatactctggaaatataagtttgctgttagctaggaaag 677

                                                    
Query: 481 agtggcaaagagagaaaggaagactattaattcttt-aaaa 520
           |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 678 agtggcaaagagagaaaggaagactattaattcttttaaaa 718


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 918
Length adjustment: 10
Effective length of query: 510
Effective length of database: 908
Effective search space:   463080
Effective search space used:   463080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)