Query= MSMg01no148_p17.b1 MSMg01no148_p17.b1 CHROMAT_FILE:
MSMg01no148_p17.b1 PHD_FILE: MSMg01no148_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:04 2005
(581 letters)
>mm_chr16_95457051_95458035
Length = 985
Score = 1050 bits (543), Expect = 0.0
Identities = 573/585 (97%), Gaps = 4/585 (0%)
Strand = Plus / Plus
Query: 1 tggccatgtctgctcactccaccctcaggagatccaagtggaggttccaaaactgtgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggccatgtctgctcactccaccctcaggagatccaagtggaggttccaaaactgtgagc 260
Query: 61 caaacataagtcccttccctttcttagttcatcatctcaggtgatccactacagtgaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaacataagtcccttccctttcttagttcatcatctcaggtgatccactacagtgaaac 320
Query: 121 aaaggtgaataatctgctggctttaaacactaagaacacatccagttacaaaaacaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaggtgaataatctgctggctttaaacactaagaacacatccagttacaaaaacaggaa 380
Query: 181 tacttatagtttaagcagctttttttttta----tcataaaatgaatttagcgctgaagt 236
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 381 tacttatagtttaagcagctttttttttaaaaaatcataaaatgaatttagcgctgaagt 440
Query: 237 attcagtgactgcctccattatatggagcgttccctaaggcctggtctcaggtgttcgca 296
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcagtgactgcctccatgatatggagcgttccctaaggcctggtctcaggtgttcgca 500
Query: 297 tgccttatggtcatgagtagttcacaccctaggaaaaatactgacttccaccaaggagat 356
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 501 tgccttatggtcatgagtagttcacaccctaggaaaaatactaacttcctccaaggagat 560
Query: 357 agacagtggatagtattctgtcatatactcaacgtttgcagctatctttgccttcaagtg 416
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 561 agacagtggatagtattctgtcatatactctacatttgcagctatctttgccttcaagtg 620
Query: 417 tctgaatgaaataagcttgatatctgaagaagcatgcaagcagtgttttgggatgaggag 476
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 tctgaatgaaataagcttgatatctttagaagcatgcaagcagtgttttgggatgaggag 680
Query: 477 agtgtattattcctgatacattgctgtaaagagacaccactggccaaaaaaacatagaag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtgtattattcctgatacattgctgtaaagagacaccactggccaaaaaaacatagaag 740
Query: 537 agaacactaaattggggcctcgcttgcagtttcaaagtatgagct 581
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaacactaaattggggcctcgcttgcagtttcaaagtatgagct 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 985
Length adjustment: 10
Effective length of query: 571
Effective length of database: 975
Effective search space: 556725
Effective search space used: 556725
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_p17.g1 MSMg01no148_p17.g1 CHROMAT_FILE:
MSMg01no148_p17.g1 PHD_FILE: MSMg01no148_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:04 2005
(613 letters)
>mm_chr16_95607344_95608356
Length = 1013
Score = 1100 bits (569), Expect = 0.0
Identities = 602/613 (98%)
Strand = Plus / Minus
Query: 1 tttcttccccgcctcggattttccatggaggacatggaaaacctttgagttgtatctcag 60
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tttcttccctgcctctgattttccatggaggacatggaaaacctttgagttgtatctcag 754
Query: 61 ccagtccttcatgccagattacccaggaagtattcactgagcggccattgctcataggcc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ccagtccttcatgccggattacccaggaagtattcactgagcggccattgctcataggcc 694
Query: 121 actctcttaggagataaccaaagaatgctgaggtcgggaagacccacccctgtgctatag 180
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 693 actctcttaggagatgaccaaagaatgctgaggtcgggaagatccacccctgtgctatag 634
Query: 181 atgtgtggcaggaaaacagacaaaatcttgaacttaggaatgatggacgttctgggattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 atgtgtggcaggaaaacagacaaaatcttgaacttaggaatgatggacgttctgggattc 574
Query: 241 ctgagcaaggggggtcaaaataggtcatgaaagcttcattcatagctgctgcgatggctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctgagcaaggggggtcaaaataggtcatgaaagcttcattcatagctgctgcgatggctt 514
Query: 301 tccagcctcttccatctcccttggcctcctctatcttcctcagccaccccctggcctctg 360
|||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 513 tccagcctgttccatctcccttggcctcctctatcttcctcagccattccctggcctctg 454
Query: 361 gcgtgctgctgtgtatgccctgcctgtgctgtttgggcagctgtgtatccttcctttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gcgtgctgctgtgtatgccctgcctgtgctgtttgggcagctgtgtatccttcctttctt 394
Query: 421 tgccaacaaactgtgctcccccttcaagacctctttacactgttcccatctgcatgctga 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 393 tgccaacaaactgtgctcccccttcaagacctctttacactgttcccgtctgcatgccga 334
Query: 481 acttggtagcaaattaatcccttttcttatgacacctgaccacctgtctcttaccccaca 540
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 actcggtagcaaattaatcccttttcttatgacacctgaccacctgtctcttaccccaca 274
Query: 541 cttatgttttactctgtattccctaaggcatgtatatgcttatttaaatagaaacaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cttatgttttactctgtattccctaaggcatgtatatgcttatttaaatagaaacaatag 214
Query: 601 catttgattctaa 613
|||||||||||||
Sbjct: 213 catttgattctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
