NAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCAGAAAGCAGCCTTCTCATGGCCACTTCCTCATAGGGTCTGGG
GCAGTACAGATGAAATGTTGATTTAGCAATTTGACTAGGGAAAGATAGAG
GGGAGAATGTATGCTATCCACAGGGAGGTTTAGAAATGCCCAGAAATTGA
ACCAGTCCATGTATATCAAAATTAGCTGGCATATATTTCTCTTTCATTTG
GGAATCCAGAGCGCTCTTGAGTGGGTGCAGCACATGGGCATAACCTGCCC
AGTTCCAAATTGGTTAACTAAAACAATTTATTTAGAGATTTTTGGACGGA
ATATATACACCATGATATAAGCTTAAGAGAAGAGGAGAATTGGTTTTTCT
GTCACTCGAGTCCAGGCACCTGGTTCCAGTAAAGTCACCGAAACAAGAAC
AAAAGAACACAGCCACCAGGGGGATTTACTCTGGGACTTTTTTTTTTCTT
GAAAACCCCCACCCCCTCCCCTCTCCCCATTCTCACCATCACACCCACTC
CTGCTTCCTGGTCATTCCCCTATAATGGGGCATATAACCTTCATAGGACC
AAGGACATCTATTCCCACTGATAACAGACTAGGGCTTCTGGCTGCCTCAG
GGAGTTTGAACTCCCTGAGAGAGTTTGAAGGGTTCTGAGAGCCCN

NNCCCATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGAACAAGGTTGTGTGGCTCCACTGA
TTTTGCTCTCAGATGGGAAAGAATGGGGCTGTACAAATGTGTCACTGAAT
GGGCTGTTCATCTCATAGGAGTCATAAAGTAGTTTTTTTGGGGGGTGGGT
AGATATAAAGATATACTGACTATTGATGAAGCTGTCCTCCTAACTGCCCC
AATTCATTCTTTCCTATCAGCTTTCGTTACTAATCTATTGAAAGCATCAC
ATTTCTTTCTATCCAATGATTCCCCAAAGCTTCAACTCAGAGCACTGCTC
CATTGGAAGCAGAACTTCAACAAATGAGTCTCTGGAAATATTCCAAATAA
CAAGCAAGATCCCATATGTTTTAAAAAATGGGTAAAAGCAATTAATAACT
TTTCAATCTAAAGATCTGTCTTTTAAAATATAAAATATATGAAGCACTGT
ACATTTTGAATGAGTTGATACCCTTTAAAAGATGTTAAAAATATTGACCA
CACACACACAAATTTGTAATTTTTTGTTTAAAAAGAAGAAAGGAATAAAA
ATTCAAATATTCTAGAGATAAAATAAAAAGAAAGTACTAAAGTGAAAGTG
AATTAGGAGTTTTGTTTGTTTTTTGCTGTGTTTGTAGTATAA

Query= MSMg01no149_a24.g1 MSMg01no149_a24.g1 CHROMAT_FILE:
MSMg01no149_a24.g1 PHD_FILE: MSMg01no149_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:11 2005
         (618 letters)



>mm_chr16_80979450_80980470
          Length = 1021

 Score = 1089 bits (563), Expect = 0.0
 Identities = 606/621 (97%), Gaps = 3/621 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgaacaaggttgtgtggctccactgattttgctctcagatgggaaagaatggggctgt 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tctggacaaggttgtgtggctccactgattttgctctcagatgggaaagaatggggctgt 762

                                                                       
Query: 61  acaaatgtgtcactgaatgggctgttcatctcataggagtcataaagtag-tttttttgg 119
           ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 761 acaaatgtgtcactgaaggggctgttcatctcataggagtcataaagtagttttttttgg 702

                                                                       
Query: 120 ggggtgggtagatataaagatatactgactattgatgaagctgtcctcctaactgcccca 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ggggtgggtagatataaagatatactgactattgatgaagctgtcctcctaactgcccca 642

                                                                       
Query: 180 attcattctttcctatcagctttcgttactaatctattgaaagcatcacatttctttcta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 attcattctttcctatcagctttcgttactaatctattgaaagcatcacatttctttcta 582

                                                                       
Query: 240 tccaatgattccccaaagcttcaactcagagcactgctccattggaagcagaacttcaac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tccaatgattccccaaagcttcaactcagagcactgctccattggaagcagaacttcaac 522

                                                                       
Query: 300 aaatgagtctctggaaatattccaaataacaagcaagatcccatatgttttaaaaaatgg 359
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aaatgagtctctggagatattccaaataacaagcaagatcccatatgttttaaaaaatgg 462

                                                                       
Query: 360 gtaaaagcaattaataacttttcaatctaaagatctgtcttttaaaatataaaatatatg 419
           |||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 461 gtaaaaacaattgataatttttcaatctaaaaatctgtcttttaaaatataaaatatatg 402

                                                                       
Query: 420 aagcactgtacattttgaatgagttgataccctttaaaagatgttaaaaatattgaccac 479
           ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 401 aagcattgtacattttaaatgagttgataccctttaaaagatgttaaaaatattgatcac 342

                                                                       
Query: 480 acacacacaaatttgtaattttttgtttaaaaagaagaaaggaataaaaattcaaatatt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 341 acacacacaaatttgtaattttttgtttaaaaagaagaaaggaataaaacttcaaatatt 282

                                                                       
Query: 540 ctagagataaaataaaaagaaagtactaaagtgaaagtgaattaggagttttgtttg--t 597
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 281 ctagtgataaaataaaaagaaagtactaaagtgaaagtgaattaggagttttgtttgttt 222

                                
Query: 598 tttttgctgtgtttgtagtat 618
           |||||||||||||||||||||
Sbjct: 221 tttttgctgtgtttgtagtat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1021
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1011
Effective search space:   614688
Effective search space used:   614688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)