Query= MSMg01no149_d17.b1 MSMg01no149_d17.b1 CHROMAT_FILE:
MSMg01no149_d17.b1 PHD_FILE: MSMg01no149_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:25 2005
(655 letters)
>mm_chr16_66606422_66607476
Length = 1055
Score = 1226 bits (634), Expect = 0.0
Identities = 646/650 (99%)
Strand = Plus / Minus
Query: 5 gaattctttcatgttgctagtgttctcctttgattccattatttcgtcatcttatgtctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gaattctttcatgttgctagtgttctcctttgattccattatttcgtcatcttatgtctt 591
Query: 65 tatatttggtgtattttcttcataatatctgtcacattacttaaattacttgttttctat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tatatttggtgtattttcttcataatatctgtcacattacttaaattacttgttttctat 531
Query: 125 tttccataaaggatttagcaggcaaaagttggagatcatttgtttcatttaattaatcat 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tttccataaaagatttagcaggcaaaagttggagatcatttgtttcatttaattaatcat 471
Query: 185 ttaatcatttatcaaatgctggtatcatgtcattggtaattaatgaatggattctgaatg 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttaatcatttatcaaacgctggtatcatgtcattggtaattaatgaatggattctgaatg 411
Query: 245 ttttcgtgaaaaaggcaagccctagatgatccccatcctggagccatggggcaggcagag 304
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 410 ttttcgtgaaaaaggcaagccctagatgatccccatcctggcgccatggggcaggcagag 351
Query: 305 ggaacaagtctgagatgaacaccagtcccaccctatgctgggaggagcagaggcaagcca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggaacaagtctgagatgaacaccagtcccaccctatgctgggaggagcagaggcaagcca 291
Query: 365 tgactaagattaccccttcccctttgccataaggaacaaacagggcattgccttcctgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tgactaagattaccccttcccctttgccataaggaacaaacagggcattgccttcctgaa 231
Query: 425 actactcctgcaatgatcccagaccccaggtgcctctaagaggagcaagtaagtggtgga 484
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 230 actactcctgcaatgatcccagaccccaggtgcctctaagagtagcaagtaagtggtgga 171
Query: 485 gcgatggaagagaaagacaaacagaaggatgcaggcacaatgaagtgaggcagaactgga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gcgatggaagagaaagacaaacagaaggatgcaggcacaatgaagtgaggcagaactgga 111
Query: 545 tcttcaagggtagtgaggaacagcctagtgtgagtagcaggagaagccacttgggaccat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tcttcaagggtagtgaggaacagcctagtgtgagtagcaggagaagccacttgggaccat 51
Query: 605 gaggaggtctaggcctgtgggttcatggccctgtagcagcaggggtctgt 654
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 gaggaggtctaggcctgtgggttcatggccctgtagcagcaggggtctgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_d17.g1 MSMg01no149_d17.g1 CHROMAT_FILE:
MSMg01no149_d17.g1 PHD_FILE: MSMg01no149_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:26 2005
(623 letters)
>mm_chr16_66543796_66544819
Length = 1024
Score = 1021 bits (528), Expect = 0.0
Identities = 600/624 (96%), Gaps = 1/624 (0%)
Strand = Plus / Plus
Query: 1 tattgccatc-aaaacctgggtgactctattgtttatcttatctcatacacatatattta 59
|||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 tattgccatcaaaaaactgggtgactctattgcttatcttatctcatacacatatattta 260
Query: 60 ttttggatatgttgaagatttcaaatcatagcttaaaaaagaattaaattatgatctcaa 119
||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||
Sbjct: 261 ttttggatatgttgaagatatctaatcataccttaaaaaagaattaaattatgatctcaa 320
Query: 120 aagaagtctttctttgtttctattcatcacagaggagagttgttcttgttacaaagctca 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 aagaagtctttctttgtttctattcatcacagaggagagttgttcttgttactaagctca 380
Query: 180 taattaaggatacagcctcagctgaatatcagtataactgtacttttccttatatagaaa 239
||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 381 taattaaagatacagcctcagctgaatatcagtatagctgtgcttttccttatatagaaa 440
Query: 240 cctcaatggtagtcttttgtagtattgttaatatacaatacatataaaatgatagatttt 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccacaatggtagtcttttgtagtattgttaatatacaatacatataaaatgatagatttt 500
Query: 300 atttaaaatgtgatatgcctttagctggctttgcttgaatcaatcaactttcatctgagt 359
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttaaaaagtgatatgcctttagctggctttgcttgaatcaatcaactttcatctgagt 560
Query: 360 ctgatgcttctctgaaaagaaagtcaacttatttaaagaacattaaatctatagaagaaa 419
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 561 ctgatgcttctctgaaaagaaagtcaacttttttaaagaacattaaatctataggagaaa 620
Query: 420 tatagagcctgctaattattttctgtgatgataaattctaaagaaataaatttatactca 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 tatagagcctgctaattattttctgtgatgataaattctaaagaaatagatttatactca 680
Query: 480 ttaaaatatgaagctttctagaaggtggattagttgcttatctatgtcatattttagaag 539
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |
Sbjct: 681 ttaaaatatgaagctttctagaaggtggattagttgcttttctatgccatattttagagg 740
Query: 540 taaaaaaggaatacagatggctcaaagtggctttccataagagtcaggcttcacatattc 599
||||| |||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||
Sbjct: 741 taaaataggaatgcagatggctcagagtagctgtccataagagtcaggcttcacatattc 800
Query: 600 acaaggaatttggtagcactgaag 623
|||||||||||||||| |||||||
Sbjct: 801 acaaggaatttggtagtactgaag 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1024
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1014
Effective search space: 621582
Effective search space used: 621582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
